DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and inaC

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_476863.1 Gene:inaC / 36897 FlyBaseID:FBgn0004784 Length:700 Species:Drosophila melanogaster


Alignment Length:170 Identity:55/170 - (32%)
Similarity:82/170 - (48%) Gaps:14/170 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   463 CLSTVHSTSQYRISVPLGVEDQYSNAAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMD 527
            |...||...|..:....|        |::::  ..||:||.:  ..|...|.|::|:..||:.||
  Fly   170 CNLNVHHACQETVPPMCG--------ADI
SE--VRGKLLLYV--ELKGNNLKVDIKEAANLIPMD 222

  Fly   528 NNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWDKDLGK 592
            .||.|||::.:|:.||.....|.||....:.|||::||.|.||..|.|.:|.:|| .|||.|...
  Fly   223 TNGFSDPYIAVQMHPDRSGRTKKKTKTIQKNLNPVFNETFTFELQPQDRDKRLLI-EVWDWDRTS 286

  Fly   593 SNDFLGSLQLGAQS-KGERLQQWLDCIRLPDHFHEKWHCL 631
            .|||:||.....:. :.|.:..|...:...:..|....|:
  Fly   287 RNDFMGSFSFSLEELQKEPVDGWYKFLSQVEGEHYNIPCV 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 4/13 (31%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 47/132 (36%)
inaCNP_476863.1 C1_cPKC_nPKC_rpt1 71..123 CDD:410342
C1 137..190 CDD:412127 6/27 (22%)
C2_PKC_alpha_gamma 194..324 CDD:175992 48/132 (36%)
STKc_PKC 375..692 CDD:270722
Blue background indicates that the domain is not in the aligned region.

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