DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and SYT10

DIOPT Version :9

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_945343.1 Gene:SYT10 / 341359 HGNCID:19266 Length:523 Species:Homo sapiens


Alignment Length:530 Identity:129/530 - (24%)
Similarity:215/530 - (40%) Gaps:140/530 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 W-LCRICSETREMWKKSGAWFFKGLPKYDMPRSASATPIPNPGPGSMAGDTRAVQSCHATPTRPA 197
            | ||..|      ||..             |.:::.|.:|              ||..:.||...
Human    77 WKLCWPC------WKSK-------------PVTSNITTLP--------------QSISSAPTEVF 108

  Fly   198 RV-KKLTIRVNDSSSSSS-------GHSEPE--DEVDTGVGIGVGVVGGGMAKGIASTRLQRE-- 250
            .. :|..|:.|:..:..:       .|:.|:  .||.|.:...:          |...|:||:  
Human   109 ETEEKKEIKENEKPAVKAIEPAIKISHTSPDIPAEVQTALKEHL----------IKHARVQRQIT 163

  Fly   251 ---DSFRLRAYGSIRSFIDGGERKLSNSFFFNRQQSQRPSECPEYDSVSMSKLRRESSFLRRGSV 312
               .|.|   :.|.|..:....:..|..|....:...:..|    .:.|:.:::.|  ..::.||
Human   164 EPTSSTR---HSSFRRHLPRQMQVSSVDFSMGTEPVLQRGE----TTTSIGRIKPE--LYKQKSV 219

  Fly   313 SSSWSISDSSGSGSNNSGNSQTQSQYQQHQQQLQQHCRDPLLGWLEIAISYREAFHSLDCTMVRA 377
                   ||.|                 :|.:..:.|     |.|...:.|......|...:::|
Human   220 -------DSEG-----------------NQNEDVKIC-----GKLNFTLQYDYENELLVVKIIKA 255

  Fly   378 RDLPAMDAAGLADPYCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEELGNSLI 442
            .||||.|..|.:|||.|:.:: |:...|:    :|:...||.||.|:||.|| .|..::|.|..:
Human   256 LDLPAKDFTGTSDPYVKMYLL-PDRKKKF----QTRVHRKTLNPLFDETFQF-PVAYDQLSNRKL 314

  Fly   443 YVALFDDDKYG-HDFLGAAKVCLSTVHSTSQYRISVPLGVEDQYSNAAEMAQNWPN--------- 497
            :.:::|.|::. ||.:|  :|.|..:.               :.|:.:..|..|.:         
Human   315 HFSVYDFDRFSRHDMIG--EVILDNLF---------------EVSDLSREATVWKDIHCATTESI 362

  Fly   498 --GKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLN 560
              |:::.||||......:.:.|.:|.||.|||..|||||:||:.|..:..:.||.||:.|..|||
Human   363 DLGEIMFSLCYLPTAGRMTLTVIKCRNLKAMDITGSSDPYVKVSLMCEGRRLKKRKTTTKKNTLN 427

  Fly   561 PIYNEEFYFEASPHDLNKEMLILTVWDKDLGKSNDFLGSLQLGAQSKGERLQQWLDCIRLPDHFH 625
            |:|||...|:..|.::::..|.:.|.|.|....|:.:|..:.|..::|.....|.:.:.    :|
Human   428 PVYNEAIIFDIPPENVDQVSLSIAVMDYDRVGHNEVIGVCRTGLDAEGLGRDHWNEMLA----YH 488

  Fly   626 EK----WHCL 631
            .|    ||.|
Human   489 RKPITHWHPL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 PHD_SF 84..172 CDD:304600 8/38 (21%)
C2A_Rabphilin_Doc2 354..477 CDD:176000 37/123 (30%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 46/135 (34%)
SYT10NP_945343.1 Cysteine motif. /evidence=ECO:0000250|UniProtKB:O35681 13..35
C2A_Synaptotagmin-1-5-6-9-10 232..356 CDD:176031 41/151 (27%)
C2B_Synaptotagmin-3-5-6-9-10 365..498 CDD:176048 47/136 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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