DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and Syt15

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_853663.2 Gene:Syt15 / 306285 RGDID:727964 Length:422 Species:Rattus norvegicus


Alignment Length:418 Identity:94/418 - (22%)
Similarity:169/418 - (40%) Gaps:80/418 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 GIASTRL-----------QREDSFRLRAYGSIRSFIDGGERKLSNSFFFNRQQSQRPSECPEYDS 294
            ||.|.||           |..|..||.          ||:..::         .|.|...||:.:
  Rat    63 GIPSVRLPSVPFVVPPSHQGRDWVRLH----------GGDWAVA---------PQDPCPVPEHIT 108

  Fly   295 VSMSKLRRESS--FLRRGSVSSSWSISDSSGSGSNNSGNSQTQSQYQQHQQQLQQHCRDPLLGWL 357
            .:.|....::|  ....||::                     ...|:..:...:....|..||.|
  Rat   109 CTSSPAAGQTSLPLCVMGSIN---------------------PELYKSSEDVSEAGFPDGCLGRL 152

  Fly   358 EIAISYREAFHSLDCTMVRARDL--PAMDAAGLADPYCKLNIITPEAHTKYTRWQRTKTVHKTRN 420
            ..::.|::....|...:::|:.|  ||...:.|.    ||::: |:..    |:.::|...||.|
  Rat   153 WFSVEYQQESERLLVDLIKAQHLQVPAETCSTLV----KLHLL-PDKR----RFLQSKAKRKTCN 208

  Fly   421 PEFNETLQFVGVEPEELGNSLIYVALFDDDKY-GHDFLGAAKVCLSTVHST---SQYRISVPLGV 481
            |:|:|:..| .|..:.:...::..:::..:|. .|..||  :|.....:.|   .::|:   :..
  Rat   209 PQFDESFIF-QVSSKSVAQRVLKFSVYHVNKQRKHQLLG--QVLFPLKNETLAGDRHRV---IWR 267

  Fly   482 EDQYSNAAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHK 546
            :.:..|...:::   .|.:...|.||.....|.|.|.:...|...::.|....|||:.|......
  Rat   268 DLEAENLEPLSE---FGDLQFCLSYNDYLSRLTVVVLRAKGLQLQEDRGVVSVFVKVSLMNHNKF 329

  Fly   547 NKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWDKDLGKSNDFLGSLQLG--AQSKGE 609
            .|..:||....::||:|||.|.|:|..::|:...|.|.|.....|..:..||.:.:|  ..::|:
  Rat   330 VKCKRTSAVLGSVNPVYNETFSFKADANELDTASLSLVVLQITEGDKSYPLGRVVVGPYMYTRGK 394

  Fly   610 RLQQWLDCIRLPDHFHEKWHCLA-PDNP 636
            .|:.|.:.:|.|....::||.|. |..|
  Rat   395 ELEHWNEMLRKPKELVKRWHALCRPMEP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 30/128 (23%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 38/133 (29%)
Syt15NP_853663.2 C2A_Synaptotagmin-15-17 150..270 CDD:176036 29/134 (22%)
C2B_Synaptotagmin-15 280..417 CDD:176054 39/136 (29%)
Blue background indicates that the domain is not in the aligned region.

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