DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and Sytl5

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_808372.1 Gene:Sytl5 / 236643 MGIID:2668451 Length:753 Species:Mus musculus


Alignment Length:780 Identity:172/780 - (22%)
Similarity:284/780 - (36%) Gaps:224/780 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SKTSE-----PLRPEEQEAIISVIRRNEEIEVAERQRVGRLVERVEKIKQHA---VERGPNCCRL 90
            ||.||     .|...|:|.|:.|::|:|.::..|.:|:.:|...:.:.|:.:   .:.....|..
Mouse     2 SKNSEFINLSFLLDHEKEMILGVLKRDEYLKKVEDKRIRKLKNELLEAKRRSGKTHQEASRVCVH 66

  Fly    91 CGDTFGILRPQRILCEDCRQSVCTKCSV---DINIRYHTSERSREIWLCRICSETREMWKKSGAW 152
            |..|.|::..:...|:.|...||::|.|   |.:            |.|.:|::..::...||.|
Mouse    67 CHKTLGLIFDRGDPCQACSLRVCSECRVTGLDGS------------WKCTVCAKVAQLRIISGEW 119

  Fly   153 FFKGLPK---------------------------------------------------YDMP--- 163
            |.:...|                                                   :|.|   
Mouse   120 FLEEKAKRFKQVNVLGTDVVRQSILRRSPGSEETQNQEQAQQCVDKSDTLSSVRQKTTHDGPKKK 184

  Fly   164 -------RSAS----ATPIPNPGPG-SMAGDTRAVQSCHATPTRPARVKKLTIRVNDSSSSSSGH 216
                   |||:    .||.|..|.. |:..|::.:||                 ...:|.|..|.
Mouse   185 GFLLSKFRSATRGEIRTPKPESGRSYSLDLDSQNLQS-----------------FKSASGSDRGS 232

  Fly   217 SEPEDEVDTGVG--IGVGVVGGGMAKGIASTRLQREDSFRLRAYGSIRSFIDGGERKLSNSFFFN 279
            :...|.:|...|  ........|   ||..|  ||.......:..||.|...|.|..::.:...|
Mouse   233 TTSSDLIDQEAGRRTSKSSYSNG---GIPVT--QRSPVPSAHSVTSINSREHGFENSMALATIEN 292

  Fly   280 ----------RQQSQRPSECPEYDSVSMSKLRRE-------------SSFLRRGS---------- 311
                      |..|..||......|:|..:.|.|             :|.:|..|          
Mouse   293 TCEELTKSHRRNTSGTPSIAVSGTSLSSERSRSEVDLSESFAEDLEDTSSIRSRSVPGALDKDLN 357

  Fly   312 -----------VSSSWSI---SDSSGSGSNNSGNSQTQSQY----------------QQHQQQLQ 346
                       |||.:|.   |.:||..:|:...|..:..|                .....:..
Mouse   358 SLEDTEDGVDLVSSRFSANTHSLASGLSTNSQAGSDRKRSYLNVPDADSDTTSLNSMMSVYSETG 422

  Fly   347 QHCRDPLLGWLEIAISYREAFHSLDCTMVRARDLPAMD-AAGLADPYCKLNIITPEAHTKYTRWQ 410
            .:....:.|.:.:.|||......|...:...|:|...| .....|.|.| :.:.|:.    :|..
Mouse   423 DYGNVKVTGEILLHISYCYKTGGLYIFVKSCRNLATGDEKKQRTDAYVK-SYLLPDK----SRNN 482

  Fly   411 RTKTVHKT-RNPEFNETLQFVGVEPEELGNSLIYVALFDDDKYG-HDFLGAAKVCLSTVHSTS-- 471
            :.||..:| .||||||||::. :...:|....:.::::..|::| :.|||..::...:.:..:  
Mouse   483 KRKTKIRTGTNPEFNETLKYT-ISHTQLETRTLQLSVWHYDRFGRNSFLGEVEIAFDSWNFENPC 546

  Fly   472 ------QYRISVPLGVEDQYSNAAEMAQNW---------PNGKMLLSLCYNTKRR---------A 512
                  |.::.:...:..||.....:...:         |.|:......:...::         .
Mouse   547 DEWFVLQPKVELAPDISLQYKGELTIVLRYIPPEENLIFPAGQRQEKKIFKRGKKKESSSISGGI 611

  Fly   513 LVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEA-SPHDL 576
            |.|.:|:..||.|:.:.|:||.|||..|.||.:|..||||:|..:::||.:|..|.|.. .|.|:
Mouse   612 LEVFIKKAKNLTAVKSGGTSDSFVKGYLLPDDNKATKHKTAVVKKSVNPEWNHTFIFSGLYPQDI 676

  Fly   577 NKEMLILTVWDKDLGKSNDFLGSLQLGA---QSKGERLQQWLDCIRLPDHFHEK--WHCLAPDNP 636
            ....|.||:|||:...||.|||.::|.:   .|.|:.: .|:|     .|..|:  |..:| |||
Mouse   677 KNACLELTIWDKEAFSSNVFLGGVRLNSGSGMSYGKTV-DWMD-----SHGEEQRLWQKMA-DNP 734

  Fly   637  636
            Mouse   735  734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710 26/155 (17%)
C2A_Rabphilin_Doc2 354..477 CDD:176000 31/133 (23%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 47/146 (32%)
Sytl5NP_808372.1 PHD_SF 11..123 CDD:473978 29/123 (24%)
FYVE_Slp5 62..108 CDD:277305 14/57 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..279 28/155 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..359 11/61 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..404 5/23 (22%)
C2A_SLP-4_5 430..553 CDD:175995 30/128 (23%)
C2B_SLP_1-2-3-4 567..745 CDD:175987 53/175 (30%)

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