DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rph and SYT11

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:XP_016856248.1 Gene:SYT11 / 23208 HGNCID:19239 Length:434 Species:Homo sapiens


Alignment Length:416 Identity:106/416 - (25%)
Similarity:168/416 - (40%) Gaps:89/416 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 QQSQRPSECPEYDSVSM-----------------SKLRR-------------------ESSFLRR 309
            ||:::..:.|.|..:.|                 .|:||                   |:..|.|
Human    42 QQAEKKQKNPPYKFIHMLKGISIYPETLSNKKKIIKVRRDKDGPGREGGRRNLLVDAAEAGLLSR 106

  Fly   310 ---------GSVSSSWSISDSSGS------GSNNSGNSQTQSQYQQHQQQLQQHCRDPLLGWLEI 359
                     ||......|....|.      .|...|.|:|.|.....:        |.:||.|..
Human   107 DKDPRGPSSGSCIDQLPIKMDYGEELRSPITSLTPGESKTTSPSSPEE--------DVMLGSLTF 163

  Fly   360 AISYREAFHSLDCTMVRARDLPAMD--AAGLADPYCKLNIITPEAHTKYTRWQRTKTVHKTRNPE 422
            ::.|.....:|..|:..|..||.||  ..| :|||.|:.|:..:.|.     .:|:.:.||.:|.
Human   164 SVDYNFPKKALVVTIQEAHGLPVMDDQTQG-SDPYIKMTILPDKRHR-----VKTRVLRKTLDPV 222

  Fly   423 FNETLQFVGVEPEELGNSLIYVALFDDDKYGH-DFLGAAKVCLSTVH-STSQYRIS---VPLGVE 482
            |:||..|.|:...:|.:.:::..:...|::.. |.:|...|.|:.|. ||.:.:::   :...::
Human   223 FDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKVQLTRDIIKRNIQ 287

  Fly   483 DQYSNAAEMAQNWPNGKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSS----DPFVKIQLKPD 543
            ...|          .|::.:||.|....:.:.|.|.:..:|..||..|.|    ||:||:.:...
Human   288 KCIS----------RGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSGRAPDPYVKVNVYYG 342

  Fly   544 AHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLI-LTVWDKDLGKSNDFLGSLQLGAQS- 606
            ..:..|.||.||..|||||:||.|.::. |.||..::.| ..|.|.|....|:.:|.|.|||.| 
Human   343 RKRIAKKKTHVKKCTLNPIFNESFIYDI-PTDLLPDISIEFLVIDFDRTTKNEVVGRLILGAHSV 406

  Fly   607 KGERLQQWLDCIRLPDHFHEKWHCLA 632
            .....:.|.:....|.....|||.|:
Human   407 TASGAEHWREVCESPRKPVAKWHSLS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 36/129 (28%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 46/137 (34%)
SYT11XP_016856248.1 C2A_Synaptotagmin-4-11 158..283 CDD:176034 36/130 (28%)
C2B_Synaptotagmin-4 292..432 CDD:176049 47/140 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.