Protein Alignment Rph and snt-3

DIOPT Version :10

• Sequence 1: NP_572651.1
• Gene: Rph / 32002
• FlyBaseID: FBgn0030230
• Length: 638
• Species: Drosophila melanogaster
• Sequence 2: NP_001379881.1
• Gene: snt-3 / 190698
• WormBaseID: WBGene00004923
• Length: 284
• Species: Caenorhabditis elegans
• Alignment Length: 288
• Identity: 98/288 - (34%)
• Similarity: 150/288 - (52%)
• Gaps: 27/288 - (9%)

  Fly   354 LGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADPYCKLNIITPEAHTKYTRWQRTKTVHKT 418
            ||.|:..:.|....:||...:::|.:|||||..|.:|||.|| .:.|:...|.    :||...|:
 Worm    16 LGRLQYKLDYDFDKNSLTVVIIQAEELPAMDLGGTSDPYVKL-FLLPDKKKKL----QTKVQRKS 75

  Fly   419 RNPEFNETLQFVGVEPEELGNSLIYVALFDDDKYG-HDFLGAAKVCLSTVHSTSQYRISVPLGVE 482
            .||.|||:..| .:...|:|...:.:.:||.|::| ||.:|               :||:|||..
 Worm    76 LNPVFNESFTF-KIPFNEIGGQTLVLNVFDFDRFGKHDQIG---------------QISIPLGKV 124

  Fly   483 DQYS--NAAEMAQNWPN---GKMLLSLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVKIQLKP 542
            |..:  ...::.::.|.   |::.|:|.|...:..|.|.|.:|.||..||..|.|||:|||.|..
 Worm   125 DLAATLERTDLIESPPENRLGEVCLALRYVPNKNKLSVVVMECKNLKKMDVLGLSDPYVKIYLMM 189

  Fly   543 DAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWDKDLGKSNDFLGSLQLGAQSK 607
            ...:.:|.||::|.:||||.|||.|.|:.:...:.:..|.:||.|.|...||:.:|.:.:|..:.
 Worm   190 GTKRLEKKKTTIKMKTLNPYYNESFSFDVTSEKMQRVHLHVTVSDYDRVGSNERIGQVIIGTCAT 254

  Fly   608 GERLQQWLDCIRLPDHFHEKWHCLAPDN 635
            |..|:||.|.:..|.....:||.|.|.|
 Worm   255 GVALKQWNDMLATPRRSVAQWHTLVPFN 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rph	NP_572651.1	FYVE_like_SF	84..172	CDD:333710
		C2A_Rabphilin_Doc2	354..477	CDD:176000	39/123 (32%)
		C2B_Rabphilin_Doc2	499..631	CDD:176030	49/131 (37%)
snt-3	NP_001379881.1	C2	16..131	CDD:472691	44/135 (33%)
		C2B_Synaptotagmin-1	144..278	CDD:176047	50/133 (38%)