DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and Doc2a

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_034199.1 Gene:Doc2a / 13446 MGIID:109446 Length:405 Species:Mus musculus


Alignment Length:305 Identity:118/305 - (38%)
Similarity:175/305 - (57%) Gaps:25/305 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 LGWLEIAISYREAFHSLDCTMVRARDLPAMDAAGLADPYCKLNIITPEAHTKYTRWQRTKTVHKT 418
            ||.||..:.|.:|...|.|.::||:.|..||..||||||.||::: |.| .|..: .:|||...|
Mouse    95 LGTLEFDLLYDQASCMLHCRILRAKGLKPMDFNGLADPYVKLHLL-PGA-CKANK-LKTKTQRNT 156

  Fly   419 RNPEFNETLQFVGVEPEELGNSLIYVALFDDDKYGH-DFLGAAKVCLSTVHSTSQYRIS------ 476
            .||.:||.|.:.|:..:::.:.::.:::.|:||..| :|:|..:|.|..:..:.:...:      
Mouse   157 LNPVWNEELTYSGITDDDITHKVLRISVCDEDKLSHNEFIGEIRVPLRRLKPSQKKHFNICLERQ 221

  Fly   477 VPLGVEDQYSNA----------AEMAQNWP-----NGKMLLSLCYNTKRRALVVNVKQCINLMAM 526
            |||......|.|          .|.|:..|     .|::||||.|:::|..|:|.:.:|.:|.||
Mouse   222 VPLPSPSSMSAALRGISCYLKELEQAEQGPGLLEERGRILLSLSYSSRRHGLLVGIVRCAHLAAM 286

  Fly   527 DNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFYFEASPHDLNKEMLILTVWDKDLG 591
            |.||.|||:||..|:||..|..||||.||.:||||.:||||::|.....|..:.|.:||||.|:|
Mouse   287 DVNGYSDPYVKTYLRPDVDKKSKHKTCVKKKTLNPEFNEEFFYEIELSTLATKTLEVTVWDYDIG 351

  Fly   592 KSNDFLGSLQLGAQSKGERLQQWLDCIRLPDHFHEKWHCLAPDNP 636
            |||||:|.:.||..::||..:.|.||:..||...|:||.|..:.|
Mouse   352 KSNDFIGGVSLGPGARGEAQKHWNDCLHQPDTALERWHTLTSELP 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 42/129 (33%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 65/131 (50%)
Doc2aNP_034199.1 Interaction with UNC13D and DYNLT1. /evidence=ECO:0000250 1..94
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..54
C2A_Rabphilin_Doc2 95..218 CDD:176000 42/125 (34%)
Interaction with UNC13D. /evidence=ECO:0000250 220..405 76/177 (43%)
C2B_Rabphilin_Doc2 259..391 CDD:176030 65/131 (50%)
Blue background indicates that the domain is not in the aligned region.

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