DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and LOC1272553

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:XP_061513620.1 Gene:LOC1272553 / 1272553 VectorBaseID:AGAMI1_002607 Length:543 Species:Anopheles gambiae


Alignment Length:586 Identity:145/586 - (24%)
Similarity:216/586 - (36%) Gaps:151/586 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 QRILCEDCRQSVCTKCSVDI----NIRYHTSERSREIWLCRICSETREMWKKSGAWFFKGLPKYD 161
            ::|..:||.   .|..||.|    ::.:|:           |.|||      .|....:..|...
Mosquito    53 RKINLQDCN---VTSGSVPIQPASSVVHHS-----------ISSET------LGTGAVEVTPSPL 97

  Fly   162 MPRSASATPIPNPGPGSMAGDTRAVQSCHATPTRPARVKKLTIRVNDSSSS----SSGHSEPEDE 222
            .| :.|||.......|:  .|||....|     |||.....|...|:|..|    ||.:.|.   
Mosquito    98 QP-TLSATGSTKKSYGT--SDTRTGPGC-----RPAHAAASTASRNNSMESVHSRSSSYRES--- 151

  Fly   223 VDTGVGIGVGVVGGGMAKGIASTRLQREDSFRLRAYGS---IRSF-------------------- 264
                       |...|....:.||....|:..||...|   :|:|                    
Mosquito   152 -----------VPKFMTHANSDTRSTTSDNLILRKSRSPSPMRTFSLEGRFPIGGPSNHSAAAVL 205

  Fly   265 IDGGER--KLSNSFFFNRQQSQRPSECPEYDSVSMSKLRRESSFLRRGSVSSSWSISDSSGSGSN 327
            .||.||  |.|.:...: ..|.|....|:         :|.|:|....|::...::.||. .||.
Mosquito   206 ADGTERGSKASLASVVS-GGSPRDFSSPK---------KRNSTFSGVVSLAGDGNVPDSP-IGSI 259

  Fly   328 NSGNSQTQSQYQQHQQQLQQHCRDP----------LLGWLEIAISYREAFHSLDCTMVRARDLPA 382
            .|.:|::..:            |.|          :||...:.:.|..:...|...:|.|:||..
Mosquito   260 RSDSSRSPRR------------RVPVILAANDIHSVLGRFHLRLKYDGSKEELLVHLVEAQDLTP 312

  Fly   383 MDAAGLADPYCKLNIITPEAHTKYTRWQRTK--TVHKTR-NPEFNETLQFVGVEPEELGNSLIYV 444
            ....|..|||.|:.:...|.       |||:  .||:|. :|.|::.|.| .::|..|..|...:
Mosquito   313 AGDTGFRDPYVKMYLEPDEE-------QRTQQTAVHRTETHPYFDQQLSF-PLKPRNLVKSNFVL 369

  Fly   445 ALFDDDKYGHD-FLGAAKVCLSTVHSTSQYRISVPLGVEDQYSNAAEMAQNWPNGKMLLSLCYNT 508
            .|.|.|::.|| .:|..:..|:|:..:........:.|.......||         :|:||.|..
Mosquito   370 QLLDYDRFSHDEVVGEIRFLLNTLDLSGCELWGDLIAVRKPSETTAE---------LLISLSYLP 425

  Fly   509 KRRALVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTL---NPIYNEEFYFE 570
            :...|.|.|.:..||..     |.:||||:.|..:..:.||.|||. .|.|   |||:||.|.||
Mosquito   426 QAERLTVVVMKAKNLSI-----SHEPFVKLYLLVNDKRTKKRKTSA-IRALDPTNPIWNEAFTFE 484

  Fly   571 ---ASPHDLNKEMLILT--VWDKDLGKSNDFLGSLQLGAQSKGERLQQWLDCIRLPDHFHEKWHC 630
               :...|...|:.:.:  ...:|||        ..:|.:..|...|.|.|.::........||.
Mosquito   485 LPSSQLQDAGVELFVTSNEAEGQDLG--------CGVGLREGGSGTQHWQDLMQNNRKPIAMWHV 541

  Fly   631 L 631
            |
Mosquito   542 L 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710 18/74 (24%)
C2A_Rabphilin_Doc2 354..477 CDD:176000 35/126 (28%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 42/139 (30%)
LOC1272553XP_061513620.1 None

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