DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and syt10

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:XP_031754327.1 Gene:syt10 / 116409668 XenbaseID:XB-GENE-29099511 Length:537 Species:Xenopus tropicalis


Alignment Length:545 Identity:115/545 - (21%)
Similarity:171/545 - (31%) Gaps:216/545 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 TPTTESTAAPST----------STETPTTKTTIGSTSTISQSCIETECD--------DGWIKTLR 387
            |....:..||||          :.:.|....|..| |..|.|.:|:|..        |...:|::
 Frog   517 TKLRSNLPAPSTKEYHVVVSGDTIKLPDISATYAS-SRFSDSGVESEPSSFATHPNTDLVFETVQ 580

  Fly   388 GNNPQKT------LCMK--------LFSHDTSSYDDASMYCYDSHQAFLT-----------GPDS 427
            |..|..:      |.||        |.:|.|.|....|     ..|:.||           .||.
 Frog   581 GQGPCNSERLFPQLLMKPDYNVKFSLGNHCTESTSAIS-----EIQSSLTSINSLPSDDELSPDE 640

  Fly   428 NDEYDKIMEQALNISDQVSDSQSMILIGLKRTTEC--------------TTDSGEQDQ------- 471
            |.:...:.|..||      ||::::.:|.....:|              ...||..|.       
 Frog   641 NSKKSVVPECHLN------DSKTVLNLGTTDLPKCDDTKKSSITLQQQSVVFSGNLDNETVAIHS 699

  Fly   472 -NSICRRPKGFIWQDGLGETSNTLINQHFNDDPGVET------SPDHVRACTGIIIVKGATNNKN 529
             ||..:.|..|::.|   |.:::.:....:..|.::|      |||.....||..|    |.|  
 Frog   700 LNSSIKDPLQFVFSD---EETSSDVKSSCSSKPNLDTMCKGFQSPDKSNNSTGTAI----TLN-- 755

  Fly   530 VYSLDCSNGEKSSGEKSKMVVCGKLGKCPATTPSTISTTSGASSSTASVS--------STILSST 586
                            ||::..|        ||..|   ||:.||...||        |.:|:  
 Frog   756 ----------------SKLICLG--------TPCVI---SGSISSNTDVSEDRTMKKNSDVLN-- 791

  Fly   587 ATTMVTSTPTTEKSSTTTTSTPTSEATSTTTAMITTTSGTTEN----PTTTDCPTKVCRYGF--- 644
            .|.|.:..||.|..:...||.|.|.:|.      ....|..||    .::||. :..|...:   
 Frog   792 LTQMYSEIPTVESETHLGTSDPFSASTD------IVKQGLVENYFGSQSSTDI-SDTCAVSYSNA 849

  Fly   645 -----------------------------HPTIRNGKVWCIRVFFHFVLNYQDGSDYCWNYFHST 680
                                         ...::||              |.:.:||      |.
 Frog   850 LSPQKETSEKEISNLQQEQDKEDEEEEQDQQMVQNG--------------YYEETDY------SA 894

  Fly   681 LSGPADENEYNVLLDQTKTDPSLVQSLTKYTKV---FMVLGAQR----TPACLYESSSAQCEKPS 738
            |.|..:.:       .|..|..:.:.|||..|:   ::..|...    |..|| ...||..|.|.
 Frog   895 LDGTINAH-------YTSRDELMEERLTKSEKINSDYLRDGINMPTVCTSGCL-SFPSAPRESPC 951

  Fly   739 GYQW-----LDNVT----DTTYAFT 754
            ..::     .|.:|    .|:|.||
 Frog   952 NVKYSSKSKFDAITKQPSSTSYNFT 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 38/177 (21%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 37/149 (25%)
syt10XP_031754327.1 C2A_Synaptotagmin-1-5-6-9-10 245..370 CDD:176031
C2B_Synaptotagmin-3-5-6-9-10 379..512 CDD:176048
Blue background indicates that the domain is not in the aligned region.

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