DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and LOC100493529

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:XP_002932169.1 Gene:LOC100493529 / 100493529 -ID:- Length:428 Species:Xenopus tropicalis


Alignment Length:327 Identity:101/327 - (30%)
Similarity:170/327 - (51%) Gaps:18/327 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 VSSSWSISDSSGSGSNNS--GNSQTQSQYQQHQQQLQQHCRDPLLGWLEIAISYREAFHSLDCTM 374
            :.::.::.|..|||..|:  .:...::...:.:.:.::...:..||.|:.::.|....:.:...:
 Frog   105 MKNALNMKDMKGSGGQNAKDDDDDAETGLTEGEDKEEEEKEEEKLGKLQFSLDYDFQNNQMQVGI 169

  Fly   375 VRARDLPAMDAAGLADPYCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNETLQFVGVEPEELGN 439
            ::|.:|||:|..|.:|||.|: ...|:...|:    .||...||.||.||||..| .:..:|||.
 Frog   170 IQATELPALDMGGTSDPYVKV-FFLPDKKKKH----ETKVHRKTLNPIFNETFTF-KIPYQELGG 228

  Fly   440 SLIYVALFDDDKYG-HDFLGAAKVCLSTVHSTSQYRISVPLGVEDQYSNAAEMAQNWPNGKMLLS 503
            ..:.::::|.|::. ||.:|..||.::||.      :..|: .|.:...:||..:....|.:.:|
 Frog   229 KTLCMSIYDFDRFSKHDIIGEVKVPMNTVD------LGQPI-EEWRDLQSAEKEEPEKLGDICIS 286

  Fly   504 LCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEFY 568
            |.|......|.|.:.:..||..||..|.|||:|||.|..:..:.||.||:||.:||||.:||.|.
 Frog   287 LRYVPTAGKLTVCILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFS 351

  Fly   569 FEASPHDLNKEMLILTVWDKD-LGKSNDFLGSLQLGAQSKGERLQQWLDCIRLPDHFHEKWHCLA 632
            ||.....:.|..:::||.|.| ||| |:.:|.:.:|..:.|..|:.|.|.:..|.....:||.|.
 Frog   352 FEIPFEQIQKVQVVITVLDYDKLGK-NEAIGKIFVGCNASGTELRHWSDMLANPRRPIAQWHPLK 415

  Fly   633 PD 634
            |:
 Frog   416 PE 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710
C2A_Rabphilin_Doc2 354..477 CDD:176000 39/123 (32%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 50/132 (38%)
LOC100493529XP_002932169.1 Syt2_N 5..116 CDD:409249 1/10 (10%)
C2A_Synaptotagmin-1-5-6-9-10 153..271 CDD:176031 38/130 (29%)
C2B_Synaptotagmin-1 280..415 CDD:176047 51/135 (38%)
Blue background indicates that the domain is not in the aligned region.

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