DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rph and syt17

DIOPT Version :10

Sequence 1:NP_572651.1 Gene:Rph / 32002 FlyBaseID:FBgn0030230 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001096478.1 Gene:syt17 / 100125097 XenbaseID:XB-GENE-949409 Length:474 Species:Xenopus tropicalis


Alignment Length:585 Identity:130/585 - (22%)
Similarity:205/585 - (35%) Gaps:206/585 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 RILCEDCRQSVCTKCSVDINIRYHTSERSREI----------WLCRICSETREMWKKSGAWFFKG 156
            |..|.:|.|. |.:||.     ..:||...||          ||....||.:|            
 Frog    24 RWTCRNCCQK-CYECSC-----CQSSEDEVEILGPFPAQTPPWLVSNRSEDKE------------ 70

  Fly   157 LPKYDMPRSASATPIPNPGPGSMAGDTRAVQSCHATP--TRPARVKKLTIRVNDSSSSSSGHSEP 219
               .|...:.|..|                    |||  |.|.|      |.:.|.:|.|.:|  
 Frog    71 ---GDSDNTTSEPP--------------------ATPQDTSPDR------RRSSSDTSRSTYS-- 104

  Fly   220 EDEVDTGVGIGVGVVGGGMAKGIASTRLQREDSFRLRAYGSIRSFIDGGERKLSNSFFFNRQQSQ 284
                              :.:.|:|.                                    :|:
 Frog   105 ------------------LTRRISSL------------------------------------ESR 115

  Fly   285 RPSECP-------EYDSVSMSKLRRESSFLRRGSVSSS---------WSISDSSGSGSNNSGNSQ 333
            |||. |       |:.::...|...:.:.||:......         :|: |||....::..:.:
 Frog   116 RPSS-PLIDIKPIEFGALGAKKEIVQPTVLRKSYTPEDYFRKFEPRLYSL-DSSNDDVDSLTDDE 178

  Fly   334 TQSQYQQHQQQLQQHCRDPLLGWLEIAISYREAFHSLDCTMVRARDLP--------AMDAAGLAD 390
            ..::||              ||.|..:..|....:.|:..::.|||||        ..|.|. ::
 Frog   179 ILTKYQ--------------LGMLHFSTQYDLLHNYLNVRVIEARDLPPPISYDGSRQDMAH-SN 228

  Fly   391 PYCKLNIITPEAHTKYTRWQRTKTVHKTRNPEFNE----TLQFVGVEPEELGNSLIYVALFDDDK 451
            ||.|:.::..:.::|.|..:|     ||:||.|.|    .:||:     |.....:.:.:.|.||
 Frog   229 PYVKICLLPDQKNSKQTGVKR-----KTQNPVFEERYTFEIQFL-----EAQRRTLLLTIVDFDK 283

  Fly   452 YG-HDFLGAAKVCLSTVHSTSQYRISVPLGVED-------------QYSNAAEMAQNWPNGKMLL 502
            :. |..:|               ::::||...|             ...|..|:      |::||
 Frog   284 FSRHCVIG---------------KVAMPLNEVDLVKGGHWWKAIIPSSQNEVEL------GELLL 327

  Fly   503 SLCYNTKRRALVVNVKQCINLMAMDNNGSSDPFVKIQLKPDAHKNKKHKTSVKWRTLNPIYNEEF 567
            ||.|......|.|::.:...|:..|.:..|||||||||.......|..|||....|::|.|||.|
 Frog   328 SLNYLPSAGRLNVDIIRAKQLLQTDMSQGSDPFVKIQLVHGLKLAKTKKTSCMRGTIDPFYNESF 392

  Fly   568 YFEASPHDLNKEMLILTVWDKDLGKSNDFLGSLQLGAQSKGE-RLQQWLDCIRLPDHFHEKWHCL 631
            .|:....:|....|:.||:..::..||||:|.:.:|..:.|. ....|...:.......|:||.|
 Frog   393 SFKVPQEELENVSLVFTVYGHNMKTSNDFIGRIVIGQYASGSPESNHWRRMLNSNRTAVEQWHSL 457

  Fly   632  631
             Frog   458  457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RphNP_572651.1 FYVE_like_SF 84..172 CDD:333710 19/79 (24%)
C2A_Rabphilin_Doc2 354..477 CDD:176000 32/135 (24%)
C2B_Rabphilin_Doc2 499..631 CDD:176030 44/132 (33%)
syt17NP_001096478.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..112 20/118 (17%)
C2A_Synaptotagmin-15-17 186..314 CDD:176036 34/153 (22%)
C2B_Synaptotagmin-17 323..457 CDD:176055 45/133 (34%)

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