DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg8a and ATG8B

DIOPT Version :9

Sequence 1:NP_727447.1 Gene:Atg8a / 32001 FlyBaseID:FBgn0052672 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_001329707.1 Gene:ATG8B / 825794 AraportID:AT4G04620 Length:122 Species:Arabidopsis thaliana


Alignment Length:115 Identity:64/115 - (55%)
Similarity:86/115 - (74%) Gaps:0/115 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KFQYKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRK 66
            |..:|..:..|.|.||..:||.|||:|||||||||.::.:.|:||||||||:|||:|||.:::||
plant     3 KNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRK 67

  Fly    67 RIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
            ||.|..|.|:|.||.|.:|||:|.|.::|:||.:||.|||:.||.||.:|
plant    68 RIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8aNP_727447.1 GABARAP 5..116 CDD:176355 62/110 (56%)
ATG8BNP_001329707.1 Ubl_ATG8 12..114 CDD:340545 59/101 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 144 1.000 Domainoid score I1480
eggNOG 1 0.900 - - E1_KOG1654
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 155 1.000 Inparanoid score I1674
OMA 1 1.010 - - QHG54038
OrthoDB 1 1.010 - - D1508198at2759
OrthoFinder 1 1.000 - - FOG0000590
OrthoInspector 1 1.000 - - mtm1018
orthoMCL 1 0.900 - - OOG6_100707
Panther 1 1.100 - - O PTHR10969
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X355
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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