Protein Alignment Atg8a and Map1lc3a

DIOPT Version :9

• Sequence 1: NP_727447.1
• Gene: Atg8a / 32001
• FlyBaseID: FBgn0052672
• Length: 121
• Species: Drosophila melanogaster
• Sequence 2: NP_080011.1
• Gene: Map1lc3a / 66734
• MGIID: 1915661
• Length: 121
• Species: Mus musculus
• Alignment Length: 114
• Identity: 36/114 - (31%)
• Similarity: 67/114 - (58%)
• Gaps: 2/114 - (1%)

  Fly     5 YKEEHAFEKRRAEGDKIRRKYPDRVPVIVEK-APKARIGDLDKKKYLVPSDLTVGQFYFLIRKRI 68
            :|:..:|..|..|..:||.::|.::|||:|: ..:.::..|||.|:|||..:.:.:...:||:|:
Mouse     7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRL 71

  Fly    69 HLRPEDALFFFVN-NVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
            .|.|..|.|..|| :.:...|..:..:|::..:||.|||:.|:.:..:|
Mouse    72 QLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8a	NP_727447.1	GABARAP	5..116	CDD:176355	35/112 (31%)
Map1lc3a	NP_080011.1	Ubl_ATG8_MAP1LC3A	4..120	CDD:340754	35/112 (31%)
		Important for interaction with ATG13 and for autophagosome formation. /evidence=ECO:0000250|UniProtKB:Q9H492	49..53		2/3 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1654
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54038
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820