DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Atg8a and flot2

DIOPT Version :9

Sequence 1:	NP_727447.1	Gene:	Atg8a / 32001	FlyBaseID:	FBgn0052672	Length:	121	Species:	Drosophila melanogaster
Sequence 2:	NP_001011034.1	Gene:	flot2 / 496443	XenbaseID:	XB-GENE-5910825	Length:	428	Species:	Xenopus tropicalis

Alignment Length:	55	Identity:	14/55 - (25%)
Similarity:	23/55 - (41%)	Gaps:	16/55 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 EEHAFEKRR-AEGDKIR------------RKYPDRVPVIVEKAPKARIGDLDKKK 48
            |..|:..:: |||:|::            ||..|.....:|...||   :.:|.|
Frog   291 EAEAYRMQQIAEGEKVKQVLYAQAEAEKIRKIGDAEAATIEAIGKA---EAEKMK 342

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Atg8a	NP_727447.1	GABARAP	5..116	CDD:176355	14/55 (25%)
flot2	NP_001011034.1	Flot	6..417	CDD:330594	14/55 (25%)
flot2	NP_001011034.1	SPFH_flotillin	34..178	CDD:259798
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1654
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900