Protein Alignment Atg8a and MAP1LC3C

DIOPT Version :9

• Sequence 1: NP_727447.1
• Gene: Atg8a / 32001
• FlyBaseID: FBgn0052672
• Length: 121
• Species: Drosophila melanogaster
• Sequence 2: NP_001004343.1
• Gene: MAP1LC3C / 440738
• HGNCID: 13353
• Length: 147
• Species: Homo sapiens
• Alignment Length: 114
• Identity: 43/114 - (37%)
• Similarity: 73/114 - (64%)
• Gaps: 2/114 - (1%)

  Fly     5 YKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKAR-IGDLDKKKYLVPSDLTVGQFYFLIRKRI 68
            :|:..:...|:.|...||.|:|:::||:||:.|:.. :..|||.|:|||.:||:.||..:||.|:
Human    13 FKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRM 77

  Fly    69 HLRPEDALFFFVNN-VIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
            .||..:|.:..||| .:...||||..:|:::.:||.|:|:.|:.:..:|
Human    78 VLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8a	NP_727447.1	GABARAP	5..116	CDD:176355	42/112 (38%)
MAP1LC3C	NP_001004343.1	GABARAP	13..126	CDD:176355	42/112 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1654
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S125
OMA	1	1.010	-	-		QHG54038
OrthoDB	1	1.010	-	-		D1508198at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	5	4.780