Protein Alignment Atg8a and map1lc3b

DIOPT Version :10

• Sequence 1: NP_727447.1
• Gene: Atg8a / 32001
• FlyBaseID: FBgn0052672
• Length: 121
• Species: Drosophila melanogaster
• Sequence 2: NP_955898.1
• Gene: map1lc3b / 322425
• ZFINID: ZDB-GENE-030131-1145
• Length: 122
• Species: Danio rerio
• Alignment Length: 114
• Identity: 35/114 - (30%)
• Similarity: 66/114 - (57%)
• Gaps: 2/114 - (1%)

  Fly     5 YKEEHAFEKRRAEGDKIRRKYPDRVPVIVEK-APKARIGDLDKKKYLVPSDLTVGQFYFLIRKRI 68
            :|:...||:|..:...||.::|:::|||:|: ..:.::..|||.|:|||..:.:.:...:||:|:
Zfish     7 FKQRRTFEQRVEDVRLIREQHPNKIPVIIERYKGEKQLPILDKTKFLVPDHVNMSELIKIIRRRL 71

  Fly    69 HLRPEDALFFFVN-NVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
            .|....|.|..|| :.:...|..:..:|:...:||.|||:.|:.:..:|
Zfish    72 QLNSNQAFFLLVNGHSMVSVSTAISEVYERERDEDGFLYMVYASQETFG 120

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8a	NP_727447.1	Ubl_ATG8_GABARAP	2..116	CDD:340752	34/112 (30%)
map1lc3b	NP_955898.1	Ubl_ATG8_MAP1LC3	15..119	CDD:340546	31/103 (30%)