DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg8a and atg8

DIOPT Version :10

Sequence 1:NP_727447.1 Gene:Atg8a / 32001 FlyBaseID:FBgn0052672 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_596531.1 Gene:atg8 / 2541386 PomBaseID:SPBP8B7.24C Length:121 Species:Schizosaccharomyces pombe


Alignment Length:116 Identity:68/116 - (58%)
Similarity:90/116 - (77%) Gaps:0/116 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFQYKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIR 65
            |:.|:|::.:||||:.|..:||.|||||:|||.||..|:.|..:||||||||||||||||.::||
pombe     1 MRSQFKDDFSFEKRKTESQRIREKYPDRIPVICEKVDKSDIAAIDKKKYLVPSDLTVGQFVYVIR 65

  Fly    66 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
            |||.|.||.|:|.|::.::|||:|.|.::|:||..||.||||.||.||.:|
pombe    66 KRIKLSPEKAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTFG 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8aNP_727447.1 Ubl_ATG8_GABARAP 2..116 CDD:340752 66/113 (58%)
atg8NP_596531.1 Ubl_ATG8 11..113 CDD:340545 62/101 (61%)

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