Protein Alignment Atg8a and lgg-3

DIOPT Version :9

• Sequence 1: NP_727447.1
• Gene: Atg8a / 32001
• FlyBaseID: FBgn0052672
• Length: 121
• Species: Drosophila melanogaster
• Sequence 2: NP_498228.1
• Gene: lgg-3 / 175793
• WormBaseID: WBGene00002982
• Length: 118
• Species: Caenorhabditis elegans
• Alignment Length: 95
• Identity: 27/95 - (28%)
• Similarity: 45/95 - (47%)
• Gaps: 8/95 - (8%)

  Fly    27 DRVPVIVEKAPKARIGDLDKKKYLV-PSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPP---- 86
            |:|.|.:.....|.:  |..||.:| |:| ||..|...:||.::::..::||.:::|...|
 Worm    27 DKVTVRLRNIADAPV--LKNKKMVVNPTD-TVASFILKLRKLLNIQANNSLFLYIDNTFAPSPDT 88

  Fly    87 TSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
            |..|:...|.....:...|.:.||....||
 Worm    89 TFETLSRCYSVKITDKEILELQYSITPAYG 118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg8a	NP_727447.1	GABARAP	5..116	CDD:176355	25/93 (27%)
lgg-3	NP_498228.1	Ubiquitin_like_fold	28..118	CDD:391949	24/92 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910