DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atg8a and fh

DIOPT Version :9

Sequence 1:NP_727447.1 Gene:Atg8a / 32001 FlyBaseID:FBgn0052672 Length:121 Species:Drosophila melanogaster
Sequence 2:XP_002935862.3 Gene:fh / 100491219 XenbaseID:XB-GENE-944116 Length:497 Species:Xenopus tropicalis


Alignment Length:36 Identity:10/36 - (27%)
Similarity:17/36 - (47%) Gaps:5/36 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KRRAEGDKIRRKY---PDRVPVIVEKAPKARIGDLD 45
            ||.|.  ::.:.|   |:....|::.|.:...|.||
 Frog    87 KRAAA--EVNQDYGLDPNIANFIIKAADEVSSGKLD 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8aNP_727447.1 GABARAP 5..116 CDD:176355 10/36 (28%)
fhXP_002935862.3 fumC 34..497 CDD:234779 10/36 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54038
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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