DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11Lbeta and APBA3

DIOPT Version :9

Sequence 1:NP_727440.3 Gene:X11Lbeta / 31997 FlyBaseID:FBgn0052677 Length:2139 Species:Drosophila melanogaster
Sequence 2:XP_006723013.1 Gene:APBA3 / 9546 HGNCID:580 Length:650 Species:Homo sapiens


Alignment Length:303 Identity:156/303 - (51%)
Similarity:205/303 - (67%) Gaps:15/303 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1772 LIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKALAPDGDVQPSTEVDLFISTEKIMV 1836
            |::||:|.|:||||||||.|..|..||||.||.||:.|:|  ||||:.||.||||||:||::|.|
Human   215 LLDGVIFGARYLGSTQLVSERNPPTSTRMAQAREAMDRVK--APDGETQPMTEVDLFVSTKRIKV 277

  Fly  1837 LNTDLKEIMMDHALRTISYIADIGDLVVLMARRRF----VPQDIDDAPKPNRTPKMICHVFESDE 1897
            |..|.:|.||||||.||||.||||.::|||||||.    .|||     ...|..||:||||.:::
Human   278 LTADSQEAMMDHALHTISYTADIGCVLVLMARRRLARRPAPQD-----HGRRLYKMLCHVFYAED 337

  Fly  1898 AQFIAQSIGQAFQVAYMEFLKANGIEDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVP 1962
            ||.|||:|||||..||.:||:.:||:.    .::.......:..:...:|:.|:..:..:||.:.
Human   338 AQLIAQAIGQAFAAAYSQFLRESGIDP
----SQVGVHPSPGACHLHNGDLDHFSNSDNCREVHLE 398

  Fly  1963 KAKGEILGVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTY 2027
            |.:||.|||.:|||||||:|||.|||||:..|.|.|.|.|:|||:|.||||.|||||||:.||..
Human   399 KRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAA 463

  Fly  2028 IKNTKNQTVVKFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVI 2070
            ::.||:||.|..::|.|.||....|.||..:.||||.|::|::
Human   464 VRETKSQTSVTLSI
VHCPPVTTAIIHRPHAREQLGFCVEDGIV 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LbetaNP_727440.3 PTB_X11 1770..1924 CDD:269919 91/155 (59%)
PDZ_signaling 1957..2042 CDD:238492 50/84 (60%)
PDZ_signaling 2047..2120 CDD:238492 10/24 (42%)
APBA3XP_006723013.1 PTB_X11 212..364 CDD:269919 91/155 (59%)
PDZ 394..477 CDD:278991 50/82 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155497
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002645
OrthoInspector 1 1.000 - - mtm8492
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12345
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2607
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
98.830

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