DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11Lbeta and si:ch73-40i7.5

DIOPT Version :10

Sequence 1:NP_727440.3 Gene:X11Lbeta / 31997 FlyBaseID:FBgn0052677 Length:2139 Species:Drosophila melanogaster
Sequence 2:XP_068080366.1 Gene:si:ch73-40i7.5 / 449850 ZFINID:ZDB-GENE-041008-110 Length:787 Species:Danio rerio


Alignment Length:371 Identity:208/371 - (56%)
Similarity:275/371 - (74%) Gaps:17/371 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1772 LIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKALAPDGDVQPSTEVDLFISTEKIMV 1836
            |::||:|.|||||||||..|..|:.:.||.||:|||.|||  ||:|:.||.|||||||||::|.|
Zfish   374 LLDGVIFGAKYLGSTQLQSEKNPSTNARMAQAQEAVDRIK--APEGESQPMTEVDLFISTQRIKV 436

  Fly  1837 LNTDLKEIMMDHALRTISYIADIGDLVVLMARR----RFVPQDIDDAPKPNRTPKMICHVFESDE 1897
            |:||.:|.||||:|:.||||||||:::||||||    |......|.:..|.:...||||||.|::
Zfish   437 LSTDTQEAMMDHSLQMISYIADIGNILVLMARRKPAGRKSADSTDSSAAPPKKCWMICHVFSSED 501

  Fly  1898 AQFIAQSIGQAFQVAYMEFLKANGIE--DHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVV 1960
            ||.|||:|||||.|||.:||..|||:  |   :|..:|.:.|.:||::..:|..|::.|..:||.
Zfish   502 AQIIAQAIGQAFGVAYQQFLYTNGIKACD---LKPGEYSDYLGTQELYNGDLVHFSRSENIREVC 563

  Fly  1961 VPKAKGEILGVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQ 2025
            :.|..|||||:.||||||||:|||||:|||:..|.|.|.|:|:|||:::::||.||||||::|||
Zfish   564 ITKKAGEILGLAIVESGWGSILPTVVVANLLHGGPAERSGELSIGDRIMSVNGTSLVGLPIATCQ 628

  Fly  2026 TYIKNTKNQTVVKFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRI 2090
            :.|::.||.:::|.::|.|.||....||||:.||||||||::|:||||:|||||||||:||||||
Zfish   629 SIIRDLKNLSMIKLSIVHCPPVTMAIIKRPDPKYQLGFSVEDGIICSLMRGGIAERGGIRVGHRI 693

  Fly  2091 IEINNQSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENP 2136
            ||||.|||||.|||||:|:|:.:|||.:..|.|.      .||..|
Zfish   694 IEINGQSVVATPHEKIINILSNAVGEAVHATRPK------CGQNVP 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LbetaNP_727440.3 PTB_X11 1770..1924 CDD:269919 92/157 (59%)
PDZ1_APBA1_3-like 1957..2042 CDD:467203 47/84 (56%)
PDZ2_APBA1_3-like 2046..2123 CDD:467255 54/76 (71%)
si:ch73-40i7.5XP_068080366.1 PTB_X11 371..527 CDD:269919 91/154 (59%)
PDZ1_APBA1_3-like 560..645 CDD:467203 47/84 (56%)
PDZ2_APBA1_3-like 649..726 CDD:467255 54/76 (71%)

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