DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11Lbeta and si:ch73-40i7.5

DIOPT Version :9

Sequence 1:NP_727440.3 Gene:X11Lbeta / 31997 FlyBaseID:FBgn0052677 Length:2139 Species:Drosophila melanogaster
Sequence 2:XP_003199465.1 Gene:si:ch73-40i7.5 / 449850 ZFINID:ZDB-GENE-041008-110 Length:742 Species:Danio rerio


Alignment Length:374 Identity:216/374 - (57%)
Similarity:288/374 - (77%) Gaps:11/374 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly  1772 LIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKALAPDGDVQPSTEVDLFISTEKIMV 1836
            |::||:|.|||||||||..|..|:.:.||.||:|||.|||  ||:|:.||.|||||||||::|.|
Zfish   374 LLDGVIFGAKYLGSTQLQSEKNPSTNARMAQAQEAVDRIK--APEGESQPMTEVDLFISTQRIKV 436

  Fly  1837 LNTDLKEIMMDHALRTISYIADIGDLVVLMARR----RFVPQDIDDAPKPNRTPKMICHVFESDE 1897
            |:||.:|.||||:|:.||||||||:::||||||    |......|.:..|.:...||||||.|::
Zfish   437 LSTDTQEAMMDHSLQMISYIADIGNILVLMARRKPAGRKSADSTDSSAAPPKKCWMICHVFSSED 501

  Fly  1898 AQFIAQSIGQAFQVAYMEFLKANGIE--DHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVV 1960
            ||.|||:|||||.|||.:||..|||:  |   :|..:|.:.|.:||::..:|..|::.|..:||.
Zfish   502 AQIIAQAIGQAFGVAYQQFLYTNGIK
ACD---LKPGEYSDYLGTQELYNGDLVHFSRSENIREVC 563

  Fly  1961 VPKAKGEILGVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQ 2025
            :.|..|||||:.||||||||:|||||:|||:..|.|.|.|:|:|||:::::||.||||||::|||
Zfish   564 ITKKAGEILGLAIVESGWGSILPTVVVANLLHGGPAERSGELSIGDRIMSVNGTSLVGLPIATCQ 628

  Fly  2026 TYIKNTKNQTVVKFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRI 2090
            :.|::.||.:::|.::|.|.||....||||:.||||||||::|:||||:|||||||||:||||||
Zfish   629 SIIRDLKN
LSMIKLSIVHCPPVTMAIIKRPDPKYQLGFSVEDGIICSLMRGGIAERGGIRVGHRI 693

  Fly  2091 IEINNQSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI 2139
            ||||.|||||.|||||:|:|:.:||||.:||||||.:|||||.:.|:::
Zfish   694 IEINGQSVVATPHEKIINILSNAVGEIHLKTMPTSTYRLLTGLDQPVFL 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LbetaNP_727440.3 PTB_X11 1770..1924 CDD:269919 92/157 (59%)
PDZ_signaling 1957..2042 CDD:238492 47/84 (56%)
PDZ_signaling 2047..2120 CDD:238492 53/72 (74%)
si:ch73-40i7.5XP_003199465.1 PTB_X11 371..527 CDD:269919 91/154 (59%)
PDZ_signaling 559..636 CDD:238492 44/76 (58%)
PDZ_signaling 649..723 CDD:238492 54/73 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590659
Domainoid 1 1.000 114 1.000 Domainoid score I6013
eggNOG 1 0.900 - - E1_KOG3605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002645
OrthoInspector 1 1.000 - - mtm6563
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12345
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2607
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.830

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