DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11Lbeta and Apba2

DIOPT Version :9

Sequence 1:NP_727440.3 Gene:X11Lbeta / 31997 FlyBaseID:FBgn0052677 Length:2139 Species:Drosophila melanogaster
Sequence 2:NP_001278095.1 Gene:Apba2 / 11784 MGIID:1261791 Length:750 Species:Mus musculus


Alignment Length:911 Identity:340/911 - (37%)
Similarity:441/911 - (48%) Gaps:213/911 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1274 TTASTTTDSNGGVGGVGHHLVATLVASPNNEQAKSQCQTQLQSHPPKTLSLDQSPSNHSKVFKNI 1338
            :|||:..|.....|.:.|          :.|......:..|:|:.|..|                
Mouse     8 STASSMLDHRARPGPIPH----------DQEPESEDTELPLESYVPTGL---------------- 46

  Fly  1339 DPELDSLYSIGVFHRPDTVQMTPPPPAPAPHRKPNNNGCSSGVVNTNGSLAGGSNDVDLLQPSSK 1403
              ||.:|       ||:    :|.|.....|....:...||..||....    ..|.|...|..:
Mouse    47 --ELGTL-------RPE----SPTPEEQECHNHSPDGDSSSDYVNNTSE----EEDYDEGLPEEE 94

  Fly  1404 -----HTPLAAAISSTLQRSSPTSTITGNGIGNGSGKTRSAGSNCSSS---ANGGMPPPIPERTN 1460
                 :........|.|:                       |.:|:..   |:|..|....|...
Mouse    95 EGVTYYIRYCPEDDSYLE-----------------------GMDCNGEEYIAHGAHPVDTDECQE 136

  Fly  1461 LVSAVQRSPSPGPNSPVWLSRHLDGGAGKDLLESGSDNHSKNHSADEEDVDTDLETDRLLGHQRL 1525
            .|.  ..:.|.||::      |..|.       ..|..:...|....||..|.||.     |.:.
Mouse   137 AVE--DWTDSVGPHT------HSHGA-------ENSQEYPDGHLPIPEDDPTVLEV-----HDQE 181

  Fly  1526 DDQGYYDENKSWDRKPRSLLSKISPKQQIPSTKTRNGYNALLSSTPELPPPIPPKGQSGLGLGLT 1590
            :| |:|..:|                                .|..:..|| ...|.:|......
Mouse   182 ED-GHYCSSK--------------------------------ESYQDYYPP-ETNGNTGGASPYR 212

  Fly  1591 LGAGNGG-----KLLDLVGGMVQRSLSRSS-SEHSEKSLSKMP-ISGGDLCAGGVDVVASTVAAT 1648
            :..|:|.     :.:|.:...::.|||.:| :..||.|...|| :..||              :|
Mouse   213 MRRGDGDLEEQEEDIDQIVAEIKMSLSMTSITSASEASPEHMPELDPGD--------------ST 263

  Fly  1649 SATVVASTPALGSPGNGGGSERSAAEMANPGGAVKLSEQEIGTINGGSVMPLGSGSGTGSGAGSG 1713
            .|...:.|      |:|.|.:.:..:..|....||         :.|.:.               
Mouse   264 EACPPSDT------GHGPGRQEARPKSLNLPPEVK---------HPGDLQ--------------- 298

  Fly  1714 AGSGTGTNAAVVANSNANNNVGGG---GGGGNNSSGSGAGSNSNSGEKKVKKSKSKEGGAV---- 1771
            .|..|.|.............|..|   ......|..:|...|:|..|.| |.:......||    
Mouse   299 RGLKTKTRTPEERPKWPQEQVCNGLEQPRKQQRSDLNGPTDNNNIPETK-KVASFPSFVAVPGPC 362

  Fly  1772 ----LIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKALA----------PDGDVQPS 1822
                ||:|::|.|.|||||||:.|..|:|:.|||||:|||||:|.:.          .:||.|..
Mouse   363 EAEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDAQTL 427

  Fly  1823 TEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRF---VPQD-IDDAP--- 1880
            |||||||||::|.|||.|.:|.||||||||||||||||::||||||||.   ..|| |:..|   
Mouse   428 TEVDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARRRMPRSASQDCIETTPGAQ 492

  Fly  1881 KPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGI--EDHRFVKEMDYQEVLNSQEIF 1943
            :..:..|||||||||::||.|||||||||.|||.|||:||||  ||   :.:.:|.:::|:||::
Mouse   493 EGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPED---LSQKEYSDIINTQEMY 554

  Fly  1944 GDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQL 2008
            .|:|..|:..|..||:.:.|.||||||||:|||||||:||||::||:|:.|.|||.|:|:||||:
Mouse   555 NDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQI 619

  Fly  2009 IAINGLSLVGLPLSTCQTYIKNTKNQTVVKFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSL 2073
            ::|||.|||||||:|||..||..||||.||..:|.|.||..|.||||:.|||||||||||:||||
Mouse   620 MSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSL 684

  Fly  2074 LRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIY 2138
            :||||||||||||||||||||.|||||..|||||..|:.|||||.|||||.:|||||||||.|:|
Mouse   685 MRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLY 749

  Fly  2139 I 2139
            |
Mouse   750 I 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LbetaNP_727440.3 PTB_X11 1770..1924 CDD:269919 104/180 (58%)
PDZ_signaling 1957..2042 CDD:238492 56/84 (67%)
PDZ_signaling 2047..2120 CDD:238492 57/72 (79%)
Apba2NP_001278095.1 PTB_X11 365..536 CDD:269919 102/170 (60%)
PDZ 569..652 CDD:395476 55/82 (67%)
PDZ 662..733 CDD:395476 57/70 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94 26/128 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..346 55/298 (18%)
STXBP1-binding 185..271 23/132 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845951
Domainoid 1 1.000 172 1.000 Domainoid score I3706
eggNOG 1 0.900 - - E1_KOG3605
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002645
OrthoInspector 1 1.000 - - mtm8726
orthoMCL 1 0.900 - - OOG6_104247
Panther 1 1.100 - - O PTHR12345
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2607
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.730

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