DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11Lbeta and apba2

DIOPT Version :10

Sequence 1:NP_727440.3 Gene:X11Lbeta / 31997 FlyBaseID:FBgn0052677 Length:2139 Species:Drosophila melanogaster
Sequence 2:XP_004917984.2 Gene:apba2 / 100498579 XenbaseID:XB-GENE-952383 Length:749 Species:Xenopus tropicalis


Alignment Length:817 Identity:315/817 - (38%)
Similarity:417/817 - (51%) Gaps:185/817 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1439 AGSNCSSSANGGMP------PPIP---ERTNLVSAVQRSPSPGPNSPVWLSRHL----------- 1483
            |...|.|:....|.      ||.|   :..:..|..:....|..||.:..|||:           
 Frog     2 ANRKCQSTTASIMDQRPRSCPPSPHAMDPGSEESVYEEVIVPDFNSRISKSRHMSNTQEDHDCND 66

  Fly  1484 ---DGGAGKDLLESGSD---------------------------------------NHSKNHSAD 1506
               ||.:..|.:.:.||                                       :|.::|...
 Frog    67 NSGDGDSSSDYVNNTSDEEYDEGLPDEEEGITYYIRYCPEDDSYLEGMDCNGEEYIHHEEHHIET 131

  Fly  1507 EEDVDT--DLETDRLLGHQRLDDQGYYDENKSWDRKPRSLLSKISPKQQIPSTKTRNGYNALLSS 1569
            :|.|:.  |..|:.....|...|:...:||:.......|.|.:.:..::...::...||....| 
 Frog   132 DECVEAVEDEWTESKTQQQHCIDRDTEEENQMITLGQDSSLEEHNQVEEAHFSENEEGYPDYYS- 195

  Fly  1570 TPE-----LPP-PIPPKGQSGLGLGLTLGAGNGGKLLDLVGGMVQRSLSRSSSEHSEKSLSKMPI 1628
             ||     ||| |.|          :..|.||                    :|..|:.:.:   
 Frog   196 -PEANGNSLPPSPFP----------IRKGDGN--------------------TEEPEEDIDQ--- 226

  Fly  1629 SGGDLCAGGVDVVASTVAATSATVVAST----PALGSPGNGGGSERSAAEMANPGGAVKLSEQEI 1689
                       :||....:.|.:.:.||    |......|.....:...:..:.|......|...
 Frog   227 -----------IVAEIKMSMSMSSINSTTDTSPEHNVTENVAKDIKEICQKVDSGHCASRHEGRP 280

  Fly  1690 GTINGGSVMPLGSGSGTGSGAGSGAGSGTG-----------TNAAVVANSNANNNVGGGGGGGNN 1743
            .::|    :|..|...|....|..|.|.|.           .|:|........:::.|       
 Frog   281 KSLN----IPSASKPATELQRGYKAKSRTPEERQKWVPEQVCNSAEQPRKQQRSDLNG------- 334

  Fly  1744 SSGSGAGSNSNSGEKKVKKSKS------------KEGGAVLIEGVLFRAKYLGSTQLVCEGQPTK 1796
                  ..::|:.:::.||..|            .|.   ||:|::|.|.:||||||:.|..|:|
 Frog   335 ------PVDNNNVQEQTKKVASFPSFVDVPGPCEPED---LIDGIIFAANFLGSTQLLSERNPSK 390

  Fly  1797 STRMMQAEEAVSRIKALA----------PDGDVQPSTEVDLFISTEKIMVLNTDLKEIMMDHALR 1851
            :.|||||:|||||:|.:.          .:||.|..|||||||||::|.|||.|.:|.|||||||
 Frog   391 NIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDSQTLTEVDLFISTQRIKVLNADTQETMMDHALR 455

  Fly  1852 TISYIADIGDLVVLMARRRF---VPQD-IDDAP---KPNRTPKMICHVFESDEAQFIAQSIGQAF 1909
            |||||||||::||||||||.   ..|| |:..|   :..:..|||||||||::||.|||||||||
 Frog   456 TISYIADIGNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAF 520

  Fly  1910 QVAYMEFLKANGI--EDHRFVKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVV 1972
            .|||.|||:||||  ||   :.:.:|.:::|:||::.|:|..|:.....||:.|.|.||||||||
 Frog   521 SVAYQEFLRANGINPED---LSQKEYSDIINTQEMYNDDLIHFSNSANCKELQVEKLKGEILGVV 582

  Fly  1973 IVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGLSLVGLPLSTCQTYIKNTKNQTVV 2037
            ||||||||:||||::||:|:.|.|||.|:|:||||:::|||.|||||||:|||..||..||||.:
 Frog   583 IVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQL 647

  Fly  2038 KFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVICSLLRGGIAERGGVRVGHRIIEINNQSVVAVP 2102
            |..:|.|.||..|.||||:.|||||||||||:||||:||||||||||||||||||||.|||||..
 Frog   648 KLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATA 712

  Fly  2103 HEKIVNLLATSVGEILMKTMPTSMFRLLTGQENPIYI 2139
            |||||..|:.|||||.|||||.:|||||||||.|:||
 Frog   713 HEKIVQALSNSVGEIHMKTMPAAMFRLLTGQETPLYI 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LbetaNP_727440.3 PTB_X11 1770..1924 CDD:269919 101/172 (59%)
PDZ1_APBA1_3-like 1957..2042 CDD:467203 57/84 (68%)
PDZ2_APBA1_3-like 2046..2123 CDD:467255 61/76 (80%)
apba2XP_004917984.2 PTB_X11 363..535 CDD:269919 102/174 (59%)
PDZ1_APBA1_3-like 567..652 CDD:467203 57/84 (68%)
PDZ2_APBA1_3-like 656..733 CDD:467255 61/76 (80%)

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