DRSC/TRiP Functional Genomics Resources

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Protein Alignment X11Lbeta and apba1a

DIOPT Version :9

Sequence 1:NP_727440.3 Gene:X11Lbeta / 31997 FlyBaseID:FBgn0052677 Length:2139 Species:Drosophila melanogaster
Sequence 2:XP_001343372.1 Gene:apba1a / 100003938 ZFINID:ZDB-GENE-060526-175 Length:968 Species:Danio rerio


Alignment Length:1173 Identity:378/1173 - (32%)
Similarity:514/1173 - (43%) Gaps:338/1173 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1074 GQQPQLQAQLTAQPMSGARRHYSGSPLMRDFDFFLDSTSRSSGERDADQDGLNHNQLLSTSSGHG 1138
            ||||         |.|..|||.:|           |.:|||:..|:...:. ||:|     |.| 
Zfish    27 GQQP---------PSSHRRRHNNG-----------DGSSRSNRSRNHGTEN-NHHQ-----SQH- 64

  Fly  1139 GGVGVSGGLGVGPGGGHNYRYSPETTDYDSNCGDLDSLSGEMNGGVSTSCSNYAKFYASAMPVLE 1203
                         .|...||          .|      .|. |||.:       :.:|:..|. |
Zfish    65 -------------QGAPRYR----------RC------EGS-NGGTN-------RTHAARRPE-E 91

  Fly  1204 DGLSSGHTSDTENNNNNQKNLQQSTVNQGGQCPTSLSGSTSIGGSGGISMLMDMKRISTNHSLNS 1268
            :|                 :.:|.|:.|    |......|.....|.     :..|:........
Zfish    92 EG-----------------DAEQQTIQQ----PIPRPAVTRYRRQGD-----NEARLRAQQQRQR 130

  Fly  1269 MNNQTTTASTTTDSNGGVGGVGHHLVATLVASPNNEQAKSQCQTQLQSHPPK---------TLSL 1324
            ...:....:...:.        |.|       ...:|..|..||.|.:..|:         :.:|
Zfish   131 QRERQQRDAERAEQ--------HRL-------EQQQQLLSPTQTMLPTREPEEAEEDEGDGSSAL 180

  Fly  1325 DQSPSNHSKVFKNID-------------PELDSLYSIGVFHRPDTVQMT---------------- 1360
            .:|.|..|....:.|             ||.::.|.|.:  ||:..:.|                
Zfish   181 ARSASTESGFHNHTDRAEGDAVMVLEAEPEDENTYGIPL--RPEAEEYTESAESEQQHGGPAYLQ 243

  Fly  1361 ---PPPPAPAPHRKPNNNG---CSSGVVNTNGSL-------------------AGGSNDVDLLQP 1400
               ||.|.|.| |:|..|.   ..:..:|.|.|.                   .|.:.|....:|
Zfish   244 PQYPPQPPPLP-REPLPNAERPLEAETLNPNYSSYVYTQPMYHNPTEAGEAHEGGATEDEQYSEP 307

  Fly  1401 SSKHT------------PLAAAISSTLQRSSPTSTITGNGIGNGSGKTRSAGSNCSSSANGGMPP 1453
            ...:|            ||:.|...|.|:..|...:....:........|...:....::|....
Zfish   308 YVDYTLQEHVYEEITDAPLSRAEGQTPQQQRPEFRLFERDLYQQQEAVGSRLHHYDERSDGESDS 372

  Fly  1454 PIPERTNLVSAVQRSPSPGPNSPVWLSRHLDGGAGKDLLESGSDNHSKNHSADEEDVDTDL-ETD 1517
            |..|       .:.:|.|..:|                            ...:||:|..: |..
Zfish   373 PEKE-------AEFAPYPRADS----------------------------CEQDEDIDQIVAEVK 402

  Fly  1518 RLLGHQRLD-------DQGYYDENKSW-DRKPRSLLSKISPKQQIPSTKTRNGYNALLSSTPELP 1574
            ..|..|.||       ..|  |:.:.| :.:....|:..:|.:.:              |..|||
Zfish   403 ESLSSQSLDRIAMGLNKDG--DKEEDWPESESHGQLNDNNPLEPV--------------SEGELP 451

  Fly  1575 PPIPPKGQSGLGLGLTLGAGNGGKLLDLVGGMVQRSLSRSSSEHSEKSLSKMPISGGDLCAGGVD 1639
            .. |.:.|:                          .:.|||.|  ::....:.|.         |
Zfish   452 RS-PSEDQA--------------------------PVIRSSRE--KRDAISLAIK---------D 478

  Fly  1640 VVASTVAATSATVVASTPALGSPGNGGGSERSAAEMANPGGAVKLSEQEIGTINGGSVMP-LGSG 1703
            :..:.....:.||                 ||......|...:.:..|::.......:.| ||:.
Zfish   479 IKEAIEEVKTRTV-----------------RSPYTPDEPKEPIWVMRQDLSPTAESDLQPSLGAD 526

  Fly  1704 S-GTGSGAGSGAGSGTGTNAAVVANSNANNNVGGGGGGGNNSSGSGAGSNSNSGEKKVKKSKSKE 1767
            | |:||.:..||.|             :::.:....|..:..|.|.||..|..............
Zfish   527 SPGSGSTSPQGAES-------------SSHQMMSQEGSDSFESPSPAGKESRRSLASFPTYVEVP 578

  Fly  1768 GGA---VLIEGVLFRAKYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKAL---------APDGDVQ 1820
            |..   .||:|::|.|.|||||||:.:..|:|:.|||||:|||||||..         ||:||.|
Zfish   579 GPCDPEDLIDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKTAQKLAKNKKKAPEGDAQ 643

  Fly  1821 PSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVPQD-------IDD 1878
            |.|||||||||::|.|||.|.:|.||||.|||||||||||::||||||||....|       .|.
Zfish   644 PMTEVDLFISTQRIKVLNADSQETMMDHPLRTISYIADIGNIVVLMARRRMPRSDSQENMEASDP 708

  Fly  1879 APKPNRTPKMICHVFESDEAQFIAQSIGQAFQVAYMEFLKANGI--EDHRFVKEMDYQEVLNSQE 1941
            |....|..|||||||||::||.|||||||||.|||.|||:||||  ||   :.:.:|.::||:|:
Zfish   709 AQDEKRQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPED---LSQKEYSDLLNTQD 770

  Fly  1942 IFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGD 2006
            ::.|:|..|:|.|..|:|.:.|.||||||:|||||||||:||||:|||:|..|.|.:.|:|||||
Zfish   771 MYNDDLIHFSKSENCKDVYIEKQKGEILGLVIVESGWGSILPTVIIANMMHGGPAEKSGRLNIGD 835

  Fly  2007 QLIAINGLSLVGLPLSTCQTYIKNTKNQTVVKFTVVPCAPVVEVKIKRPETKYQLGFSVQNGVIC 2071
            |:::|||.|||||||||||:.||..|||:.:|..:|.|.||..|.|:||:.:||||||||||:||
Zfish   836 QIMSINGTSLVGLPLSTCQSIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIIC 900

  Fly  2072 SLLRGGIAERGGVRVGHRIIEINNQSVVAVPHEKIVNLLATSVGEILMKTMPTSMFRLLTGQENP 2136
            ||:||||||||||||||||||||:|||||.||||||::|:.:||||.|||||.:|:||||.||.|
Zfish   901 SLMRGGIAERGGVRVGHRIIEINSQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQEQP 965

  Fly  2137 IYI 2139
            :||
Zfish   966 VYI 968

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
X11LbetaNP_727440.3 PTB_X11 1770..1924 CDD:269919 104/174 (60%)
PDZ_signaling 1957..2042 CDD:238492 55/84 (65%)
PDZ_signaling 2047..2120 CDD:238492 55/72 (76%)
apba1aXP_001343372.1 PTB_X11 583..754 CDD:269919 104/170 (61%)
PDZ 787..870 CDD:278991 54/82 (66%)
PDZ_signaling 876..949 CDD:238492 55/72 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590663
Domainoid 1 1.000 175 1.000 Domainoid score I3583
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 530 1.000 Inparanoid score I1184
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6563
orthoMCL 1 0.900 - - OOG6_104247
Panther 1 1.100 - - LDO PTHR12345
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.890

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