DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2111 and Lvrn

DIOPT Version :10

Sequence 1:NP_572644.1 Gene:CG2111 / 31995 FlyBaseID:FBgn0030223 Length:931 Species:Drosophila melanogaster
Sequence 2:XP_038953135.1 Gene:Lvrn / 502160 RGDID:1562779 Length:987 Species:Rattus norvegicus


Alignment Length:924 Identity:258/924 - (27%)
Similarity:411/924 - (44%) Gaps:130/924 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RLPKWLVPLSYRVDIVTR-----INQPYQPFGGTVVIDLRSERSTKRIVLNAH-----------D 73
            |||.|||||.|.:::..|     ::.|...|.|.|.|.:|...:|..::|::.           .
  Rat    94 RLPPWLVPLHYDLELWPRLQPDNLSTPSLTFTGRVNITVRCTVATSTLLLHSFFLNYKQVEVWGP 158

  Fly    74 LAIGKRRAVTLSDKNGNSVPVSSIQMDIKLSRLTVSLKRPLKVNVTYSMRVAFT-SVLRNDNTGF 137
            ||...|.|..      ..||:.::...:.:..:.:.|.:.|....:|.:...|: .||:..:.|.
  Rat   159 LAPDTRNATV------GRVPLENVWFALDMQYVVLDLGQSLDPGSSYELNFDFSGQVLQEGSEGL 217

  Fly   138 YSSNYVDHNTTLTQWLAATQFEPNHAREAFPCFDDPIFRTPFKINLAHPYLYRALSNMPVQRTIR 202
            :.:.|.|.:.  .:.|.|||.||..||..|||||:|..:..|.|.:.|...|.||||||......
  Rat   218 FLNLYTDEDQ--LRALIATQMEPTFARHVFPCFDEPALKATFNITIIHHPGYVALSNMPQLGQSH 280

  Fly   203 HASLKDYVW--TQFVESHPMQTYLVAFMISKFDRPGFTSSERSDCPISTWARPDALSQ--TEFAN 263
            ...:....|  |.|..:..|.|||||.:|..||   :.|.......|..|||.|.::.  .:||.
  Rat   281 RIDVNGSRWTVTSFHTTPRMPTYLVALVICDFD---YVSRTERGKEIRVWARKDDIADGYLDFAA 342

  Fly   264 MVVAPLLSFYEDLFNSTYRQKKIDLVALPDFTFKSKENWGLPAFAEESLLYDSQRSSIDDQQGVA 328
            ....|:.||.|||||.:|...|.|::|||.|...:.|||||..| :.|||.:     :||.....
  Rat   343 NHTGPVFSFLEDLFNISYPLPKTDIIALPTFVNGAMENWGLMIF-DASLLLE-----LDDDLPEK 401

  Fly   329 RAVAMMVV-----NQWFGNLVSVAWWHEIWLKNVFALYLSRFGVHSLRPEWDYQERHALQLYLSV 388
            ||:.:.::     :|||||||:::||:.|||...||.|......:...|:........|.:...:
  Rat   402 RAMILSILSHEVGHQWFGNLVTMSWWNNIWLNEGFASYFEVGLTNYFYPKVPRNMIFFLTVLHDI 466

  Fly   389 LDYDAHVNTDLVTASVPDESHIWAAYNEIGE-------RKAAVLFEMLHRVMGEEAWLTALRRYL 446
            |:.|..:.:..|  |.|.|:  :....||..       :|.|.:..||...:.:..::.||:.||
  Rat   467 LEDDHSLESRAV--STPVEN--FTETREINRLFDIYTYKKGACMAWMLAGFLSQHLFINALKSYL 527

  Fly   447 VVYANRTATSSDFWDLLQLQVDRNGRLGKGLNITRIMKCWLGQPGYPLVTVTRNYDHRTAIVSQQ 511
            ..::...|...|.|..:|:.:|....:.....:.|||..|..|.|:|::|:..:    |.:|.|:
  Rat   528 ETFSYSNAEQDDLWRHIQMAIDEQSIIHLPATVKRIMDSWTHQSGFPVITLNAS----TGVVKQE 588

  Fly   512 RFFI------TPQFRNRWARNPCWWVPLSYTCPSCQHSEIISFSRWLTCPTSKPSSKSNTVLL-E 569
            .|::      |....|.|. .|.:|:....|.|..          ||        .||:.:.. .
  Rat   589 PFYLERVENQTLLSHNTWI-VPIFWMKNGITQPLV----------WL--------DKSSMIFPGM 634

  Fly   570 KLEAEPTDWILFNVQHTAPFRVNYDLRNWQLLNKTL-ADPNKFRLIHRVNRAQLVDDLFSLAWSG 633
            ||....:||::.|...|..:|||||...|:.||:.| .||   :.|..:||.|||.|.|:|:.:.
  Rat   635 KLSDSDSDWVILNFNVTGYYRVNYDKLGWKKLNQQLEKDP---KAIPVINRLQLVSDAFALSKNN 696

  Fly   634 DIEYDMALGILGYLEHEDEFVVWVATEISFERIN-NVAKSNPNYLIFKTYMRLLLERQ------F 691
            .||.:.||.:..|:..|||.:||.  |:....|| .|.....||.::....:..|:|.      :
  Rat   697 YIEIETALDLTKYIAKEDEILVWF--EVLVNLINREVVYDVKNYYLYPLLKKYFLKRLNSIWTIY 759

  Fly   692 KRVISSDLTSSSGN-MTHRPV--IIRLACEYELPACVSLARREFMKGTPEKGGWMTIRE------ 747
            ..:|..::.|...| ::..|:  ....||...|..|:.|:|..|.|       ||...|      
  Rat   760 SAIIRENMASLQDNFLSLLPLKKFFETACWLGLEDCLQLSRELFRK-------WMAHPETAIPPQ 817

  Fly   748 -RETVVCTAVKFGTEGDRDMVESMYKRSNFAAEKES---LLTALACSRNVFALQRVL---IWTFE 805
             .:.|:|.|:..|:..|.|.:.::|  .|...|:|.   |:.|:.||::...|.|.:   |..|.
  Rat   818 IEKVVLCNAIALGSNKDWDFLFNLY--INKTEEQEDLFHLVHAMGCSKDPRTLNRFMEYDITVFP 880

  Fly   806 SSGVRKQNARRTFKAVVSNSMGYRLAKKYVSVNMQNI-RNYCSNSTDKVVNLMTPLIECLSTPKE 869
            |    :.|.....:.|..:.:|..:||.::..|...: ..|...|.:.:|::   |...:||.::
  Rat   881 S----RFNETNLIEVVAESEVGRYVAKDFLINNWVAVYERYGPQSLNTLVSI---LGRTVSTDQQ 938

  Fly   870 LLYFSKFFKEILRD 883
            ::...:|...:|.:
  Rat   939 VMELQQFLSTVLEE 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2111NP_572644.1 M1_APN-Q_like 33..487 CDD:341064 139/486 (29%)
ERAP1_C 578..897 CDD:463368 89/331 (27%)
LvrnXP_038953135.1 M1_APN-Q_like 102..569 CDD:341064 140/487 (29%)
ERAP1_C 643..948 CDD:463368 88/325 (27%)

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