DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9806 and ltah-1.2

DIOPT Version :9

Sequence 1:NP_572643.1 Gene:CG9806 / 31994 FlyBaseID:FBgn0030222 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_500385.1 Gene:ltah-1.2 / 177123 WormBaseID:WBGene00022610 Length:625 Species:Caenorhabditis elegans


Alignment Length:662 Identity:120/662 - (18%)
Similarity:224/662 - (33%) Gaps:202/662 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 NLRPLH-----YNLSLLT-EVEPLKLSGNFS-----GEVIIRLRVWRETRTIIL----------S 69
            |.||..     .|::.:| |...:|.:.:|.     |:..:|.|...:...::|          |
 Worm     6 NFRPKRDPCSAANINEITVEHTAIKWTVSFQLKMIIGQATLRCRCLTDATKLVLDVRDLSIRSVS 70

  Fly    70 NNGL----QVGENVLLVRRNTGGRVTV---RKMWQASSVHQLGIVF------NSMLWLGEEYTLV 121
            .||:    ::..||...   .|.:::|   .:..:|.::.|:.:.:      .::.|:.:|.|. 
 Worm    71 INGVDCDFRIAPNVYTF---FGSKMSVYLPPQFQKAGTILQVTVAYGTSPDATALQWMKKEQTA- 131

  Fly   122 VQFSGQLSRASGYFVGGYMDSKHHPQWIAVTQLAPNLANTVFPCFENRTFLAPFILNLAHPRGTN 186
                                .|..|...:..|...  |.::.||.:..:..:.:...:..|.|..
 Worm   132 --------------------DKRMPYLFSQCQAIH--ARSIVPCMDTPSVKSTYEAEVTVPTGMT 174

  Fly   187 AVSNMRVLKTSDHEKDDYVWTTFQQTPAMSVQKLAFSINRFTNRTSAEIPKGPALTTWLRPKIAD 251
            .:  |..:.......||.....::|..|:....:|..:.....|..::     ....|..|.:.|
 Worm   175 CL--MSAIGQGSKGDDDTTTFFYKQPVAIPSYLIAIVVGCLEKRDISD-----RCAVWAEPSVVD 232

  Fly   252 QGDYAISITPQIIVFFISLFGKPYPAMKIDQLVLPDTAYQSHEHLGLVSYPEAAFLYSAQRSTTR 316
            :..:..:.|..|:.....:.|| |...:.|.:.||.:.     ..|.:..|...||.....:..|
 Worm   233 KAHWEFAETEDILASAEEIAGK-YIWGRYDMVCLPPSF-----PFGGMENPCLTFLTPTLIAGDR 291

  Fly   317 AKQQVASHVAQEFAHHWLSDL-ENAAL--YWLHNGLS--------------DYVSGFA----VDN 360
            :   :.|.:|.|.||.|..:| .|::.  :||:.|.:              ||....|    .::
 Worm   292 S---LVSVIAHEIAHSWSGNLVTNSSWEHFWLNEGFTMFIERKICGRLVSEDYRQFMAFNGWTNS 353

  Fly   361 VEPAWRFHELSMVRQALAVLVEDSKSSAYPMSLAYASKSSDTQANQKSALLFRMLHSLIGTQAFL 425
            :.||  .:|..........|::| .::..| .:|:    |.....:.|||||.:...|.|::.|.
 Worm   354 LIPA--VYEQFTPTHQFTKLIQD-HTNVDP-DVAF----SCVPYEKGSALLFYLEQKLGGSEIFE 410

  Fly   426 NALRLYLQR-SHKGSSSNQAFLW--HTLQEESDNQMSLRQDIKVSQLMDSW----TMQPGYPLIR 483
            ..|:.||:. :|:...|.|   |  |..:..:|     ::::..:...|.|    .|.|..|   
 Worm   411 AYLKDYLKTFAHQAIDSWQ---WKDHLYKYFAD-----QKEVLDTVNFDLWFNGVGMPPEKP--- 464

  Fly   484 VVRNYD----------------TNEVTV----TQERFLRNPGKLMQKRQQCW------------- 515
               ||.                .:|.||    :::.:...|.:.::...|.|             
 Worm   465 ---NYGQSMVEACEVLLKKWLAADESTVGDITSEDYYAMQPLQQIELLSQLWQHDPPIEHYKLDA 526

  Fly   516 ------------------WVPLTFATAGIDSFVSTLPSEWLTC----------QGRQTASPLILN 552
                              |:.|            .:.|:|..|          |||......|..
 Worm   527 LNKLYKLNDSQNSELLLNWLRL------------CIKSKWEECIPKALDFVNSQGRLKFCRPIYR 579

  Fly   553 EVAQPDKWVVFN 564
            ::||   |.:.|
 Worm   580 DLAQ---WPIAN 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9806NP_572643.1 ERAP1_C 561..878 CDD:288671 1/4 (25%)
Peptidase_M1 25..392 CDD:279741 75/420 (18%)
GluZincin 30..480 CDD:301352 95/511 (19%)
ltah-1.2NP_500385.1 M1_LTA4H 12..455 CDD:341062 93/500 (19%)
Leuk-A4-hydro_C 500..614 CDD:378127 16/104 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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