DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9806 and Lta4h

DIOPT Version :9

Sequence 1:NP_572643.1 Gene:CG9806 / 31994 FlyBaseID:FBgn0030222 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_032543.2 Gene:Lta4h / 16993 MGIID:96836 Length:611 Species:Mus musculus


Alignment Length:580 Identity:121/580 - (20%)
Similarity:208/580 - (35%) Gaps:131/580 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LGEEYTLVVQFSGQLSRASG---YFVGGYMDSKHHPQWIAVTQLAPNLANTVFPCFENRTFLAPF 175
            |.:...:|::.|.:.|..|.   :........|.||...:..|...  ...:.||.:..:....:
Mouse    95 LSKNQEIVIEISFETSPKSSALQWLTPEQTSGKQHPYLFSQCQAIH--CRAILPCQDTPSVKLTY 157

  Fly   176 ILNLAHPRGTNA-VSNMRVLKTSDHEKDDYVWTTFQQTPAMSVQKLAFSINRFTNRTSAEIPKGP 239
            ...::.|:...| :|.:|..:..|.|........|.|...:....:|..:....:|..     ||
Mouse   158 TAEVSVPKELVALMSAIRDGEAPDPEDPSRKIYRFNQRVPIPCYLIALVVGALESRQI-----GP 217

  Fly   240 ALTTWLRPKIADQGDYAISITPQIIVFFISLFGKPYPAMKIDQLVLPDTAYQSHEHLGLVSYP-- 302
            ....|...:..::.....|.|..::.....| |.||...:.|.||||.            |:|  
Mouse   218 RTLVWSEKEQVEKSANEFSETESMLKIAEDL-GGPYVWGQYDLLVLPP------------SFPYG 269

  Fly   303 --EAAFLYSAQRSTTRAKQQVASHVAQEFAHHWLSDLENAAL---YWLHNGLSDYVSGFAVDNV- 361
              |...|.....:.....:.:::.:|.|.:|.|..:|.....   :||:.|.:.|:.......: 
Mouse   270 GMENPCLTFVTPTLLAGDKSLSNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLF 334

  Fly   362 -EPAWRFHEL-------SMVR-----QALAVLVEDSKSSAYPMSLAYASKSSDTQANQKSALLFR 413
             |....||.|       :.::     .....||.|.|.  ....:||:|    ....:..||||.
Mouse   335 GEKFRHFHALGGWGELQNTIKTFGESHPFTKLVVDLKD--VDPDVAYSS----IPYEKGFALLFY 393

  Fly   414 MLHSLIGTQAFLNALRLYLQR-SHKGSSSN--QAFLWHTLQEESD--NQMSLRQDIKVSQLMDSW 473
            :...|.|.:.||..|:.|::: |::..:::  ::||:...:::.|  ||:.          .::|
Mouse   394 LEQLLGGPEVFLGFLKAYVKKFSYQSVTTDDWKSFLYSHFKDKVDLLNQVD----------WNTW 448

  Fly   474 TMQPGYPLIRVVRNYDTNEVTVTQERFLRNPGKLMQKRQQCWWVPL------TFATAGIDSFVST 532
            ...||.|.::  .|||   ||:|      |....:.:|    ||..      :|:.|.:....|.
Mouse   449 LYAPGLPPVK--PNYD---VTLT------NACIALSQR----WVTAKEEDLSSFSIADLKDLSSH 498

  Fly   533 LPSEWLTCQGRQTASPLILNEVAQPDKWVVFN-----------LRLATPCRITYDERNW-QLIGN 585
            ..:|:| .|..|.| ||.|..:.:..:...||           |||..       :..| :.|..
Mouse   499 QLNEFL-AQVLQKA-PLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCI-------QSKWEEAIPL 554

  Fly   586 ALSGTNASSIDRFTRAQLISDVLNLAGAGVVTYDLALNFLGHLRNEDEFIVWQAADTYLE 645
            ||.........:||| .|..|        :..:|         ::.|     ||..||.|
Mouse   555 ALKMATEQGRMKFTR-PLFKD--------LAAFD---------KSHD-----QAVHTYQE 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9806NP_572643.1 ERAP1_C 561..878 CDD:288671 21/97 (22%)
Peptidase_M1 25..392 CDD:279741 56/302 (19%)
GluZincin 30..480 CDD:301352 78/395 (20%)
Lta4hNP_032543.2 leuko_A4_hydro 6..608 CDD:274120 121/580 (21%)
M1_LTA4H 6..450 CDD:189006 76/390 (19%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 135..137 0/1 (0%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 267..272 1/4 (25%)
Leuk-A4-hydro_C 468..607 CDD:286244 35/160 (22%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 564..566 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.