DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and RABH1e

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_196588.3 Gene:RABH1e / 830890 AraportID:AT5G10260 Length:207 Species:Arabidopsis thaliana


Alignment Length:160 Identity:58/160 - (36%)
Similarity:96/160 - (60%) Gaps:2/160 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDDERFK 72
            :|::.|||..||||.::.||..::|...::.|:|:|....::...| |..| ||:|||:..|||:
plant    10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVR-LQLWDTAGQERFR 72

  Fly    73 LLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVSMAQG 137
            .|..:..|.:...::|||:.:.:||.|...|::::|......|.::|||||:|..:.||||:.:|
plant    73 SLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEG 137

  Fly   138 FNYAHRQSICFEEVSAKSGRNVYDIFSSLA 167
            .|.|....:.|.|.|||:|.|:..:|..:|
plant   138 DNKARDYGVIFIETSAKAGFNIKPLFRKIA 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 57/158 (36%)
RABH1eNP_196588.3 Rab6 10..170 CDD:206654 58/160 (36%)

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