DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and RABB1a

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_193449.1 Gene:RABB1a / 827427 AraportID:AT4G17160 Length:205 Species:Arabidopsis thaliana


Alignment Length:168 Identity:62/168 - (36%)
Similarity:99/168 - (58%) Gaps:2/168 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDD 68
            |...||.||:||:||||:|||::|:|.:|...|.:|:|::....::...:..:  .||:|||:..
plant     3 YAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPI--KLQIWDTAGQ 65

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVS 133
            |.|:.:..:..|...|.|||||||..::|.::..|::|.|:...:.:|.:|:|||.|..:.|.||
plant    66 ESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCDLEDKRTVS 130

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIY 171
            ..:|..:|....:.|.|.|||:..||.:.|...|..||
plant   131 TEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIY 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 58/158 (37%)
RABB1aNP_193449.1 PLN03108 1..204 CDD:178655 62/168 (37%)

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