DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and Rab13

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_112354.1 Gene:Rab13 / 81756 RGDID:620880 Length:203 Species:Rattus norvegicus


Alignment Length:167 Identity:79/167 - (47%)
Similarity:103/167 - (61%) Gaps:2/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDD 68
            ||:.||::::||||||||||::||:::.|...:..|:|:|.:..:||....|:  .||||||:..
  Rat     5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRI--KLQVWDTAGQ 67

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVS 133
            ||||.:.....|.|.||:||||||..|||:||..|||.|:......|..||:|||.|....|:|.
  Rat    68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQ 132

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDI 170
            ..|....|....|.|.|.||||..||.:.|||||.||
  Rat   133 REQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 73/158 (46%)
Rab13NP_112354.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 78/166 (47%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 3/13 (23%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..203
Blue background indicates that the domain is not in the aligned region.

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