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Protein Alignment Rab9Db and Rab1a
DIOPT Version :9
Sequence 1: | NP_572642.1 |
Gene: | Rab9Db / 31993 |
FlyBaseID: | FBgn0030221 |
Length: | 197 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_112352.2 |
Gene: | Rab1a / 81754 |
RGDID: | 619736 |
Length: | 205 |
Species: | Rattus norvegicus |
Alignment Length: | 170 |
Identity: | 69/170 - (40%) |
Similarity: | 106/170 - (62%) |
Gaps: | 6/170 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 QYDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGR--MLQVWDT 65
:||..||::::|||||||:|||:||:|:.:||.:..|:|:|.:..::|.. |: .||:|||
Rat 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD----GKTIKLQIWDT 67
Fly 66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHR 130
:..|||:.:.::..|.||||::|||:|..:||.|:..|::||.|...:.|..||||||.|....:
Rat 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKK 132
Fly 131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDI 170
.|.......:|....|.|.|.|||:..||...|.::|.:|
Rat 133 VVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1149105at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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