DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and rab12

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:XP_002937521.2 Gene:rab12 / 779581 XenbaseID:XB-GENE-492791 Length:248 Species:Xenopus tropicalis


Alignment Length:167 Identity:68/167 - (40%)
Similarity:101/167 - (60%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDDE 69
            |...::||:|..|||||.|:.||:|:.|.|..:.|||:|.:..:||....::  .||:|||:..|
 Frog    44 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI--RLQIWDTAGQE 106

  Fly    70 RFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVSM 134
            ||..:.:...|||.||:||||||..::|:::..|||.|.:...::..:||||||.|....|:::.
 Frog   107 RFNSITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETDREITR 171

  Fly   135 AQGFNYAHR-QSICFEEVSAKSGRNVYDIFSSLAMDI 170
            .||..:|.: ..:.|.|.|||...||.:||..|..||
 Frog   172 QQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDI 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 64/159 (40%)
rab12XP_002937521.2 P-loop containing Nucleoside Triphosphate Hydrolases 47..248 CDD:476819 67/164 (41%)

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