DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and rab5b

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001005723.1 Gene:rab5b / 448258 XenbaseID:XB-GENE-489150 Length:215 Species:Xenopus tropicalis


Alignment Length:167 Identity:57/167 - (34%)
Similarity:91/167 - (54%) Gaps:16/167 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVG---MDRREC----SVEFADWRMGRMLQVWDT 65
            ||:::||:|.|||:.|::||...||.|....|:|   :.:..|    :|:|         ::|||
 Frog    21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQSVCLDDTTVKF---------EIWDT 76

  Fly    66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHR 130
            :..||:..|.....|.|...::|||||:.::|.....|:||::|.....:.:.|.|||:|..:.|
 Frog    77 AGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPNIVIALSGNKADLTSKR 141

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLA 167
            .|...:...||...|:.|.|.|||:..||.|:|.::|
 Frog   142 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 56/165 (34%)
rab5bNP_001005723.1 Rab5_related 20..182 CDD:206653 57/167 (34%)

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