DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and rab30

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001006108.1 Gene:rab30 / 448082 XenbaseID:XB-GENE-479337 Length:203 Species:Xenopus tropicalis


Alignment Length:175 Identity:65/175 - (37%)
Similarity:102/175 - (58%) Gaps:2/175 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSQYDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDT 65
            |..||..|||:::|::|||||||:.||:...|......|:|:|....:||....::  .||:|||
 Frog     3 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGEKI--KLQIWDT 65

  Fly    66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHR 130
            :..|||:.:..:..|||:.::|.||||..:||:.:..|::||.:....:|..:|||||.|....|
 Frog    66 AGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYANSEVITVLVGNKIDLAERR 130

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRR 175
            :||..:...:|..|::.:.|.|||...||..:|..||..:.:..|
 Frog   131 EVSQQRAEEFAGTQNMYYLETSAKESDNVEKLFLDLACRLISEAR 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 59/158 (37%)
rab30NP_001006108.1 Rab30 3..171 CDD:133314 64/169 (38%)

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