DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and rab35b

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001003548.1 Gene:rab35b / 445154 ZFINID:ZDB-GENE-040801-62 Length:201 Species:Danio rerio


Alignment Length:163 Identity:69/163 - (42%)
Similarity:107/163 - (65%) Gaps:3/163 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDD 68
            ||:.||::|:|||||||:.||:||:||.|:..:..|:|:|.:..:||....::  .||:|||:..
Zfish     5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKV--KLQIWDTAGQ 67

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVS 133
            |||:.:.:|..|..||:::|||:||::||.|:..|:.||.:.| |.|..:|||||:||||.:.|.
Zfish    68 ERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPNSKVVE 131

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSL 166
            ......:|.:..|...|.|||...||.::|:.:
Zfish   132 TNDAQKFAEQMGISLFETSAKENVNVEEMFNCI 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 67/159 (42%)
rab35bNP_001003548.1 P-loop containing Nucleoside Triphosphate Hydrolases 3..201 CDD:476819 69/163 (42%)

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