DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and Rab18

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster


Alignment Length:169 Identity:59/169 - (34%)
Similarity:96/169 - (56%) Gaps:9/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMD--RRECSVEFADWRMGRMLQVWDTSD 67
            |...|::::|:|||||:.|:.||.:|:|.:.|.||:|||  .:...|:..|:::.    :|||:.
  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVA----LWDTAG 63

  Fly    68 DERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPD-KVTVLLVGNKSDDPNHRQ 131
            .|||:.|..:..|.|.|.:|||||||..|...::.|:.|:.....: .:.:::||||.|:  .|.
  Fly    64 AERFRSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKIDE--ERV 126

  Fly   132 VSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDI 170
            |...:|..:|.:....|.|.|||..:.|.|:|..:...|
  Fly   127 VDREEGRKFARKHRALFIETSAKCDQFVSDVFKDVVEKI 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 57/161 (35%)
Rab18NP_524744.2 Rab18 6..165 CDD:206656 57/164 (35%)

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