DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and RabX1

DIOPT Version :9

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster


Alignment Length:187 Identity:56/187 - (29%)
Similarity:97/187 - (51%) Gaps:11/187 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KIIILGDSGVGKTCLLMRFSDNQFTERHR-----VTVGMDRRECSVEFADWRMGRMLQVWDTSDD 68
            |:::||..|||||.|::|:..|..   ||     .|:.:....|::...:.::  .||:|||:..
  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTL---HRKESEVPTIAVSFFTCNIILDEVKI--KLQIWDTAGQ 66

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVS 133
            ||::.:.....|:|:..:||:|:|..|:|..|..|::|:.|...|.:.:.|||||.|....|.||
  Fly    67 ERYRAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVS 131

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFSLTSWQEEE 190
            ..:.|.:|......:.|.|.::.:.:..:|.|.|..:........:| ||.|:|..:
  Fly   132 REEAFVFATSIGATYFETSTETDQGLEQVFISTAQGLVRLADEGKSP-SLRSFQSTD 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 RAB 8..171 CDD:197555 51/166 (31%)
Rab 8..167 CDD:206640 50/162 (31%)
RabX1NP_524713.1 Ras 7..166 CDD:278499 50/163 (31%)
Rab 7..166 CDD:206640 50/163 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454292
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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