DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and Rab11

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_477170.1 Gene:Rab11 / 42501 FlyBaseID:FBgn0015790 Length:214 Species:Drosophila melanogaster


Alignment Length:171 Identity:61/171 - (35%)
Similarity:100/171 - (58%) Gaps:6/171 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRML--QVWDT 65
            :||..||::::|||||||:.||.||:.|:|....:.|:|::....|:|..    |:.:  |:|||
  Fly     7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVD----GKTIKAQIWDT 67

  Fly    66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHR 130
            :..||::.:.:...|.|.|.||||||....:::|::.|::|:|......:.::|||||||..:.|
  Fly    68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLR 132

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIY 171
            .|...:...:|.|..:.|.|.||....||...|.::..:||
  Fly   133 SVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIY 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 57/160 (36%)
Rab11NP_477170.1 Rab11_like 9..173 CDD:206660 58/167 (35%)

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