DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and rab35l

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_989002.1 Gene:rab35l / 394598 XenbaseID:XB-GENE-5809894 Length:201 Species:Xenopus tropicalis


Alignment Length:180 Identity:71/180 - (39%)
Similarity:113/180 - (62%) Gaps:6/180 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDD 68
            ||:.||::::|||||||:.||:|||||.|:..:..|:|:|.:..::.....|:  .||:|||:..
 Frog     6 YDHLFKLLLIGDSGVGKSSLLLRFSDNSFSGSYITTIGVDFKIRTLVLDGERV--KLQIWDTAGQ 68

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVS 133
            |||:.:.:|..|:.||:::|||:||.:||.|:..|:.||.:.| |.|..:|||||.|||:.::|.
 Frog    69 ERFRTITSTYYRNTHGVIVVYDVTSPESFVNVKRWLHEITQNC-DSVCTVLVGNKDDDPSRKRVE 132

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRR---VHYNP 180
            .|....:|.:..:...|.|||..|||.::|.|:...:...::   ...||
 Frog   133 AADAKRFADQMGVRMFETSAKENRNVEEMFLSVTRMVLRMKKDNQARLNP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 67/158 (42%)
rab35lNP_989002.1 P-loop containing Nucleoside Triphosphate Hydrolases 4..201 CDD:476819 71/180 (39%)

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