DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9Db and rab1ba

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_957436.1 Gene:rab1ba / 394117 ZFINID:ZDB-GENE-040426-873 Length:201 Species:Danio rerio


Alignment Length:170 Identity:68/170 - (40%)
Similarity:107/170 - (62%) Gaps:6/170 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGR--MLQVWDT 65
            :||..||::::|||||||:|||:||:|:.:||.:..|:|:|.:..::|..    |:  .||:|||
Zfish     4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD----GKTIKLQIWDT 64

  Fly    66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHR 130
            :..|||:.:.::..|.||||::|||:|..:|:.|:..|::||.|...:.|..||||||.|....:
Zfish    65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKK 129

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDI 170
            .|.......:|...:|.|.|.|||:..||...|.::|.:|
Zfish   130 VVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 64/160 (40%)
rab1baNP_957436.1 Rab1_Ypt1 7..172 CDD:206661 66/167 (40%)

Return to query results.
Submit another query.