DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and Rab3

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster


Alignment Length:167 Identity:63/167 - (37%)
Similarity:97/167 - (58%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDD 68
            :|..||::|:|:|.||||..|.|::|:.||.....|||:|.:..:|...|.|:  .||:|||:..
  Fly    18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRV--KLQIWDTAGQ 80

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVS 133
            ||::.:.....|.|.|.:|:||:|:..||.::..|:.:|:....|...|:|||||.|..:.|.:|
  Fly    81 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVIS 145

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDI 170
            ..:|...|.:..:.|.|.|||...||..:|..| :||
  Fly   146 FERGRQLADQLGVEFFETSAKENVNVKAVFERL-VDI 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 59/158 (37%)
Rab3NP_523687.1 Rab3 21..185 CDD:206657 62/164 (38%)

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