DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and rab5aa

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_958893.1 Gene:rab5aa / 337737 ZFINID:ZDB-GENE-030131-139 Length:216 Species:Danio rerio


Alignment Length:169 Identity:59/169 - (34%)
Similarity:91/169 - (53%) Gaps:20/169 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVG---------MDRRECSVEFADWRMGRMLQVW 63
            ||:::||:|.|||:.|::||...||.|....|:|         :|  :.:|:|         ::|
Zfish    22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLD--DTTVKF---------EIW 75

  Fly    64 DTSDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPN 128
            ||:..||:..|.....|.|...::|||||:.:||.....|:||::|.....:.:.|.|||:|..|
Zfish    76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLAN 140

  Fly   129 HRQVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLA 167
            .|.|......:||...|:.|.|.|||:..||.:||.::|
Zfish   141 KRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIA 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 58/167 (35%)
rab5aaNP_958893.1 Rab5_related 21..183 CDD:206653 59/169 (35%)

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