DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and Rab5a

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_080163.1 Gene:Rab5a / 271457 MGIID:105926 Length:215 Species:Mus musculus


Alignment Length:167 Identity:59/167 - (35%)
Similarity:92/167 - (55%) Gaps:16/167 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVG---MDRREC----SVEFADWRMGRMLQVWDT 65
            ||:::||:|.|||:.|::||...||.|....|:|   :.:..|    :|:|         ::|||
Mouse    21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKF---------EIWDT 76

  Fly    66 SDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHR 130
            :..||:..|.....|.|...::|||||:.:||.....|:||::|.....:.:.|.|||:|..|.|
Mouse    77 AGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKR 141

  Fly   131 QVSMAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLA 167
            .|...:..:||...|:.|.|.|||:..||.:||.::|
Mouse   142 AVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 58/165 (35%)
Rab5aNP_080163.1 Rab5_related 20..182 CDD:206653 59/167 (35%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 44..56 5/11 (45%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 77..93 4/15 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..215
Blue background indicates that the domain is not in the aligned region.

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