DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and Rab12

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_037149.1 Gene:Rab12 / 25530 RGDID:3527 Length:243 Species:Rattus norvegicus


Alignment Length:167 Identity:69/167 - (41%)
Similarity:99/167 - (59%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDDE 69
            |...::||:|..|||||.|:.||:|:.|.|..:.|||:|.:..:||....::  .||:|||:..|
  Rat    39 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI--RLQIWDTAGQE 101

  Fly    70 RFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVSM 134
            ||..:.:...|||.||:||||||..::|.::..|||.|.:...:...:||||||.|....|::|.
  Rat   102 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREISR 166

  Fly   135 AQGFNYAHR-QSICFEEVSAKSGRNVYDIFSSLAMDI 170
            .||..:|.: ..:.|.|.|||...||.:||..|..||
  Rat   167 QQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDI 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 65/159 (41%)
Rab12NP_037149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
Rab12 42..243 CDD:206699 68/164 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 64..78 5/13 (38%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 96..113 5/16 (31%)
Blue background indicates that the domain is not in the aligned region.

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