DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and Rab8b

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_775589.1 Gene:Rab8b / 235442 MGIID:2442982 Length:207 Species:Mus musculus


Alignment Length:169 Identity:74/169 - (43%)
Similarity:102/169 - (60%) Gaps:2/169 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDD 68
            ||..||::::|||||||||||.|||::.|......|:|:|.:..::|....::  .||:|||:..
Mouse     5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI--KLQIWDTAGQ 67

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVS 133
            |||:.:.....|.|.||:||||||:.|||.||..|::.|.......|..:::|||.|..:.||||
Mouse    68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVS 132

  Fly   134 MAQGFNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYT 172
            ..:|...|....|.|.|.||||..||.:.|.:||.||.|
Mouse   133 KERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMT 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 67/158 (42%)
Rab8bNP_775589.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 73/168 (43%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 3/13 (23%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 5/16 (31%)

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