DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and RAB12

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001020471.3 Gene:RAB12 / 201475 HGNCID:31332 Length:340 Species:Homo sapiens


Alignment Length:167 Identity:68/167 - (40%)
Similarity:99/167 - (59%) Gaps:3/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDDE 69
            |...::||:|..|||||.|:.||:|:.|.|..:.|||:|.:..:||....::  .||:|||:..|
Human   136 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKI--RLQIWDTAGQE 198

  Fly    70 RFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVSM 134
            ||..:.:...|||.||:||||||..::|.::..|||.|.:...:...:||||||.|....|:::.
Human   199 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITR 263

  Fly   135 AQGFNYAHR-QSICFEEVSAKSGRNVYDIFSSLAMDI 170
            .||..:|.: ..:.|.|.|||...||.:||..|..||
Human   264 QQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDI 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 64/159 (40%)
RAB12NP_001020471.3 Rab12 139..340 CDD:206699 67/164 (41%)

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