DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and Rab33b

DIOPT Version :9

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_058554.1 Gene:Rab33b / 19338 MGIID:1330805 Length:229 Species:Mus musculus


Alignment Length:199 Identity:69/199 - (34%)
Similarity:109/199 - (54%) Gaps:24/199 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDDERF- 71
            ||||::|||.||||||..||...:|.:|...|:|:|.||.:|:....|:  .:|:|||:..||| 
Mouse    34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERI--KIQLWDTAGQERFR 96

  Fly    72 KLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRR-LCPDKVTVLLVGNKSDDPNHRQV--S 133
            |.:.....|:.|.::.|||:|:..||.::..|::|.:: |..:.:..:|||||.|..:..||  .
Mouse    97 KSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTD 161

  Fly   134 MAQGFNYAHRQSICFEEVSAKS---GRNVYDIFSSLAMDIYTYR----------RVHYNPF---S 182
            :||.|...|  |:...|.|||:   ..:|..||.:||..:.:::          |:...|.   :
Mouse   162 LAQKFADTH--SMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQLPDNRISLKPETKPA 224

  Fly   183 LTSW 186
            :|.|
Mouse   225 VTCW 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 RAB 8..171 CDD:197555 65/169 (38%)
Rab 8..167 CDD:206640 63/165 (38%)
Rab33bNP_058554.1 Rab33B_Rab33A 32..201 CDD:133315 65/170 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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