DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and rab-21

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_495854.1 Gene:rab-21 / 187932 WormBaseID:WBGene00004279 Length:207 Species:Caenorhabditis elegans


Alignment Length:192 Identity:60/192 - (31%)
Similarity:100/192 - (52%) Gaps:6/192 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDDERFK 72
            |||::||:..|||:.|::||.:|:|:.:|..|:....:..:|...|.:..  |.:|||:..|::.
 Worm    13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQAD--LHIWDTAGQEKYH 75

  Fly    73 LLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVSMAQG 137
            .|.....|.::|:|||:|||..|||:.:..|:.||:....:...:|:||||.|....|||:....
 Worm    76 ALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQDA 140

  Fly   138 FNYAHRQSICFEEVSAKSGRNVYDIFSSLAMDIYTYRRVHYNPFSLTSWQ----EEEDAEES 195
            ..||..:...:.|.||:....:.|.|.||...:..:.|........|:..    :.::||.|
 Worm   141 EAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRTRSTEPPSTNRSIRLIDNDEAERS 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 54/158 (34%)
rab-21NP_495854.1 Rab21 13..174 CDD:133323 55/162 (34%)

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