DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and F08G12.1

DIOPT Version :9

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_509888.1 Gene:F08G12.1 / 181320 WormBaseID:WBGene00008585 Length:635 Species:Caenorhabditis elegans


Alignment Length:179 Identity:50/179 - (27%)
Similarity:79/179 - (44%) Gaps:50/179 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGR-----MLQV 62
            ||:  .||:|.||..||||||..|.....|.|.:..|     .|..|...:|....     .:.|
 Worm    41 QYN--LKIVIRGDRNVGKTCLWKRLQGLSFQEEYVAT-----EEIQVANINWNYRATDDVVKVDV 98

  Fly    63 WDTSD--------DERFKL------------LKATQC--------RSAHGILLVYDITSSKSFQN 99
            ||..|        |::.||            .:.|.|        :..:|::.|:|||.:.:::.
 Worm    99 WDIVDQSTKKRVKDDKLKLANNGMDKNDGLDYEDTACDARFVDVYKGTNGVIFVFDITKTWTWEY 163

  Fly   100 IDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQV------SMAQGFNYAH 142
            :   .|||.:: |:|:.||::.|:.|..:||||      :..:.||.:|
 Worm   164 V---QKEIVKV-PNKIPVLVLANRRDMGHHRQVTDLQCSTFVELFNSSH 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 RAB 8..171 CDD:197555 48/174 (28%)
Rab 8..167 CDD:206640 48/174 (28%)
F08G12.1NP_509888.1 P-loop_NTPase 44..>193 CDD:304359 44/157 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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