DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Db and rab-19

DIOPT Version :10

Sequence 1:NP_572642.1 Gene:Rab9Db / 31993 FlyBaseID:FBgn0030221 Length:197 Species:Drosophila melanogaster
Sequence 2:NP_001370091.1 Gene:rab-19 / 178301 WormBaseID:WBGene00004278 Length:210 Species:Caenorhabditis elegans


Alignment Length:166 Identity:60/166 - (36%)
Similarity:92/166 - (55%) Gaps:5/166 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDNPFKIIILGDSGVGKTCLLMRFSDNQFTERHRVTVGMDRRECSVEFADWRMGRMLQVWDTSDD 68
            :|..|||:::||.||||||::.||.:..|.:|...|:|:|....::.....|:  .||:|||...
 Worm     7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRV--KLQIWDTGGQ 69

  Fly    69 ERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEIRRLCPDKVTVLLVGNKSDDPNHRQVS 133
            |||:.:..:..|||:||:|.||||..:||.::..|:.::.:.....|..||:|.|.|..:.|.:.
 Worm    70 ERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIE 134

  Fly   134 MAQGFNYAHRQSICFE--EVSAKSGRNVYDIFSSLA 167
             |:......|.:..|.  |.|||...||.:.|..||
 Worm   135 -AEEAEMLQRANGMFAMLETSAKGNVNVDNAFLELA 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9DbNP_572642.1 Rab 8..167 CDD:206640 57/160 (36%)
rab-19NP_001370091.1 Rab19 8..172 CDD:133267 60/165 (36%)

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